Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scarb1Q61009 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scarb1Q61009 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
Scarb1Q61009 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Scarb1Q61009 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scarb1Q61009 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scarb1Q61009 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scarb1Q61009 Amer2-203ENSMUST00000225247 2662 ntBASIC21.07■□□□□ 0.96
Scarb1Q61009 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scarb1Q61009 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scarb1Q61009 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Scarb1Q61009 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Scarb1Q61009 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scarb1Q61009 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Scarb1Q61009 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scarb1Q61009 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Scarb1Q61009 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Scarb1Q61009 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scarb1Q61009 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Scarb1Q61009 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Scarb1Q61009 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scarb1Q61009 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scarb1Q61009 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Scarb1Q61009 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Scarb1Q61009 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.98■□□□□ 0.95
Scarb1Q61009 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scarb1Q61009 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.97■□□□□ 0.95
Scarb1Q61009 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Scarb1Q61009 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scarb1Q61009 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scarb1Q61009 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scarb1Q61009 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scarb1Q61009 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Scarb1Q61009 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scarb1Q61009 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scarb1Q61009 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scarb1Q61009 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Scarb1Q61009 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scarb1Q61009 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Scarb1Q61009 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Scarb1Q61009 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scarb1Q61009 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scarb1Q61009 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scarb1Q61009 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scarb1Q61009 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scarb1Q61009 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scarb1Q61009 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scarb1Q61009 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scarb1Q61009 Gm25262-201ENSMUST00000174934 133 ntBASIC20.84■□□□□ 0.93
Scarb1Q61009 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scarb1Q61009 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scarb1Q61009 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scarb1Q61009 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.82■□□□□ 0.92
Scarb1Q61009 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.82■□□□□ 0.92
Scarb1Q61009 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scarb1Q61009 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.81■□□□□ 0.92
Scarb1Q61009 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scarb1Q61009 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scarb1Q61009 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scarb1Q61009 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scarb1Q61009 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scarb1Q61009 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Scarb1Q61009 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Scarb1Q61009 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scarb1Q61009 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.77■□□□□ 0.92
Scarb1Q61009 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scarb1Q61009 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scarb1Q61009 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scarb1Q61009 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.75■□□□□ 0.91
Scarb1Q61009 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scarb1Q61009 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Scarb1Q61009 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scarb1Q61009 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scarb1Q61009 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.73■□□□□ 0.91
Scarb1Q61009 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Scarb1Q61009 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Scarb1Q61009 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scarb1Q61009 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Scarb1Q61009 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Scarb1Q61009 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Scarb1Q61009 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.7■□□□□ 0.9
Scarb1Q61009 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scarb1Q61009 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scarb1Q61009 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scarb1Q61009 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scarb1Q61009 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.69■□□□□ 0.9
Scarb1Q61009 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Scarb1Q61009 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scarb1Q61009 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scarb1Q61009 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scarb1Q61009 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scarb1Q61009 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scarb1Q61009 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.67■□□□□ 0.9
Scarb1Q61009 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scarb1Q61009 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scarb1Q61009 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Scarb1Q61009 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scarb1Q61009 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Scarb1Q61009 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.64■□□□□ 0.89
Scarb1Q61009 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms