Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.73■■□□□ 1.07
Trav5d-4Q5R1F6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Trav5d-4Q5R1F6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trav5d-4Q5R1F6 Gm24804-201ENSMUST00000174982 85 ntBASIC21.71■■□□□ 1.07
Trav5d-4Q5R1F6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trav5d-4Q5R1F6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trav5d-4Q5R1F6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trav5d-4Q5R1F6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Trav5d-4Q5R1F6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trav5d-4Q5R1F6 Zxda-201ENSMUST00000117281 2621 ntBASIC21.65■■□□□ 1.06
Trav5d-4Q5R1F6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trav5d-4Q5R1F6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Trav5d-4Q5R1F6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trav5d-4Q5R1F6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.63■■□□□ 1.05
Trav5d-4Q5R1F6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trav5d-4Q5R1F6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Trav5d-4Q5R1F6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trav5d-4Q5R1F6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trav5d-4Q5R1F6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trav5d-4Q5R1F6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Trav5d-4Q5R1F6 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.6■■□□□ 1.05
Trav5d-4Q5R1F6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trav5d-4Q5R1F6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav5d-4Q5R1F6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trav5d-4Q5R1F6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trav5d-4Q5R1F6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trav5d-4Q5R1F6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Trav5d-4Q5R1F6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Trav5d-4Q5R1F6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Trav5d-4Q5R1F6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Trav5d-4Q5R1F6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trav5d-4Q5R1F6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trav5d-4Q5R1F6 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.56■■□□□ 1.04
Trav5d-4Q5R1F6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trav5d-4Q5R1F6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trav5d-4Q5R1F6 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.55■■□□□ 1.04
Trav5d-4Q5R1F6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trav5d-4Q5R1F6 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.55■■□□□ 1.04
Trav5d-4Q5R1F6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Trav5d-4Q5R1F6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Trav5d-4Q5R1F6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trav5d-4Q5R1F6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trav5d-4Q5R1F6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trav5d-4Q5R1F6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Trav5d-4Q5R1F6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trav5d-4Q5R1F6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Trav5d-4Q5R1F6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trav5d-4Q5R1F6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.51■■□□□ 1.03
Trav5d-4Q5R1F6 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.51■■□□□ 1.03
Trav5d-4Q5R1F6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trav5d-4Q5R1F6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trav5d-4Q5R1F6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.5■■□□□ 1.03
Trav5d-4Q5R1F6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.5■■□□□ 1.03
Trav5d-4Q5R1F6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Trav5d-4Q5R1F6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Trav5d-4Q5R1F6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Trav5d-4Q5R1F6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trav5d-4Q5R1F6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Trav5d-4Q5R1F6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Trav5d-4Q5R1F6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trav5d-4Q5R1F6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trav5d-4Q5R1F6 Gm16148-201ENSMUST00000119653 893 ntBASIC21.46■■□□□ 1.03
Trav5d-4Q5R1F6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trav5d-4Q5R1F6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trav5d-4Q5R1F6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trav5d-4Q5R1F6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trav5d-4Q5R1F6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trav5d-4Q5R1F6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trav5d-4Q5R1F6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trav5d-4Q5R1F6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trav5d-4Q5R1F6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trav5d-4Q5R1F6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trav5d-4Q5R1F6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.37■■□□□ 1.01
Trav5d-4Q5R1F6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trav5d-4Q5R1F6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trav5d-4Q5R1F6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trav5d-4Q5R1F6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.34■■□□□ 1.01
Trav5d-4Q5R1F6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
Trav5d-4Q5R1F6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trav5d-4Q5R1F6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.32■■□□□ 1
Trav5d-4Q5R1F6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trav5d-4Q5R1F6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trav5d-4Q5R1F6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trav5d-4Q5R1F6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trav5d-4Q5R1F6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trav5d-4Q5R1F6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.3■■□□□ 1
Trav5d-4Q5R1F6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trav5d-4Q5R1F6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.3■■□□□ 1
Trav5d-4Q5R1F6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.3■■□□□ 1
Trav5d-4Q5R1F6 Amer2-203ENSMUST00000225247 2662 ntBASIC21.29■■□□□ 1
Trav5d-4Q5R1F6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trav5d-4Q5R1F6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Trav5d-4Q5R1F6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
Trav5d-4Q5R1F6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trav5d-4Q5R1F6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trav5d-4Q5R1F6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trav5d-4Q5R1F6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trav5d-4Q5R1F6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Trav5d-4Q5R1F6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trav5d-4Q5R1F6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms