Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Trav15-1-dv6-1Q5R1D2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav15-1-dv6-1Q5R1D2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav15-1-dv6-1Q5R1D2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav15-1-dv6-1Q5R1D2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Trav15-1-dv6-1Q5R1D2 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.51■□□□□ 0.71
Trav15-1-dv6-1Q5R1D2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav15-1-dv6-1Q5R1D2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trav15-1-dv6-1Q5R1D2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav15-1-dv6-1Q5R1D2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.49■□□□□ 0.71
Trav15-1-dv6-1Q5R1D2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav15-1-dv6-1Q5R1D2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav15-1-dv6-1Q5R1D2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav15-1-dv6-1Q5R1D2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav15-1-dv6-1Q5R1D2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Trav15-1-dv6-1Q5R1D2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav15-1-dv6-1Q5R1D2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav15-1-dv6-1Q5R1D2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav15-1-dv6-1Q5R1D2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav15-1-dv6-1Q5R1D2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trav15-1-dv6-1Q5R1D2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav15-1-dv6-1Q5R1D2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav15-1-dv6-1Q5R1D2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trav15-1-dv6-1Q5R1D2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trav15-1-dv6-1Q5R1D2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav15-1-dv6-1Q5R1D2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trav15-1-dv6-1Q5R1D2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav15-1-dv6-1Q5R1D2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav15-1-dv6-1Q5R1D2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.41■□□□□ 0.7
Trav15-1-dv6-1Q5R1D2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav15-1-dv6-1Q5R1D2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trav15-1-dv6-1Q5R1D2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trav15-1-dv6-1Q5R1D2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav15-1-dv6-1Q5R1D2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trav15-1-dv6-1Q5R1D2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav15-1-dv6-1Q5R1D2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Trav15-1-dv6-1Q5R1D2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Trav15-1-dv6-1Q5R1D2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.39■□□□□ 0.69
Trav15-1-dv6-1Q5R1D2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav15-1-dv6-1Q5R1D2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav15-1-dv6-1Q5R1D2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav15-1-dv6-1Q5R1D2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.36■□□□□ 0.69
Trav15-1-dv6-1Q5R1D2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav15-1-dv6-1Q5R1D2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav15-1-dv6-1Q5R1D2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trav15-1-dv6-1Q5R1D2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav15-1-dv6-1Q5R1D2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trav15-1-dv6-1Q5R1D2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav15-1-dv6-1Q5R1D2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav15-1-dv6-1Q5R1D2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trav15-1-dv6-1Q5R1D2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav15-1-dv6-1Q5R1D2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav15-1-dv6-1Q5R1D2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trav15-1-dv6-1Q5R1D2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav15-1-dv6-1Q5R1D2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav15-1-dv6-1Q5R1D2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav15-1-dv6-1Q5R1D2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav15-1-dv6-1Q5R1D2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav15-1-dv6-1Q5R1D2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.28■□□□□ 0.68
Trav15-1-dv6-1Q5R1D2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav15-1-dv6-1Q5R1D2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.28■□□□□ 0.68
Trav15-1-dv6-1Q5R1D2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.27■□□□□ 0.67
Trav15-1-dv6-1Q5R1D2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trav15-1-dv6-1Q5R1D2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.26■□□□□ 0.67
Trav15-1-dv6-1Q5R1D2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav15-1-dv6-1Q5R1D2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav15-1-dv6-1Q5R1D2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav15-1-dv6-1Q5R1D2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Trav15-1-dv6-1Q5R1D2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
Trav15-1-dv6-1Q5R1D2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.25■□□□□ 0.67
Trav15-1-dv6-1Q5R1D2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav15-1-dv6-1Q5R1D2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trav15-1-dv6-1Q5R1D2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav15-1-dv6-1Q5R1D2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trav15-1-dv6-1Q5R1D2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.22■□□□□ 0.67
Trav15-1-dv6-1Q5R1D2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav15-1-dv6-1Q5R1D2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav15-1-dv6-1Q5R1D2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav15-1-dv6-1Q5R1D2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trav15-1-dv6-1Q5R1D2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav15-1-dv6-1Q5R1D2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav15-1-dv6-1Q5R1D2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.19■□□□□ 0.66
Trav15-1-dv6-1Q5R1D2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trav15-1-dv6-1Q5R1D2 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.18■□□□□ 0.66
Trav15-1-dv6-1Q5R1D2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav15-1-dv6-1Q5R1D2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav15-1-dv6-1Q5R1D2 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.17■□□□□ 0.66
Trav15-1-dv6-1Q5R1D2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav15-1-dv6-1Q5R1D2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trav15-1-dv6-1Q5R1D2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav15-1-dv6-1Q5R1D2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav15-1-dv6-1Q5R1D2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav15-1-dv6-1Q5R1D2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav15-1-dv6-1Q5R1D2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav15-1-dv6-1Q5R1D2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav15-1-dv6-1Q5R1D2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav15-1-dv6-1Q5R1D2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav15-1-dv6-1Q5R1D2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trav15-1-dv6-1Q5R1D2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav15-1-dv6-1Q5R1D2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms