Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trdv4Q5R1A3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Trdv4Q5R1A3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Trdv4Q5R1A3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trdv4Q5R1A3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
Trdv4Q5R1A3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trdv4Q5R1A3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trdv4Q5R1A3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trdv4Q5R1A3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Trdv4Q5R1A3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trdv4Q5R1A3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trdv4Q5R1A3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.88■□□□□ 0.93
Trdv4Q5R1A3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Trdv4Q5R1A3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trdv4Q5R1A3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trdv4Q5R1A3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trdv4Q5R1A3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trdv4Q5R1A3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trdv4Q5R1A3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Trdv4Q5R1A3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trdv4Q5R1A3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trdv4Q5R1A3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Trdv4Q5R1A3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.85■□□□□ 0.93
Trdv4Q5R1A3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.84■□□□□ 0.93
Trdv4Q5R1A3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trdv4Q5R1A3 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.84■□□□□ 0.93
Trdv4Q5R1A3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trdv4Q5R1A3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trdv4Q5R1A3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trdv4Q5R1A3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trdv4Q5R1A3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trdv4Q5R1A3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trdv4Q5R1A3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trdv4Q5R1A3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trdv4Q5R1A3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Trdv4Q5R1A3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trdv4Q5R1A3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Trdv4Q5R1A3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trdv4Q5R1A3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Trdv4Q5R1A3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trdv4Q5R1A3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trdv4Q5R1A3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trdv4Q5R1A3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.78■□□□□ 0.92
Trdv4Q5R1A3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trdv4Q5R1A3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.76■□□□□ 0.91
Trdv4Q5R1A3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trdv4Q5R1A3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trdv4Q5R1A3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trdv4Q5R1A3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.74■□□□□ 0.91
Trdv4Q5R1A3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Trdv4Q5R1A3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trdv4Q5R1A3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trdv4Q5R1A3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trdv4Q5R1A3 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.71■□□□□ 0.91
Trdv4Q5R1A3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trdv4Q5R1A3 Gm16148-201ENSMUST00000119653 893 ntBASIC20.71■□□□□ 0.91
Trdv4Q5R1A3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Trdv4Q5R1A3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trdv4Q5R1A3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trdv4Q5R1A3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trdv4Q5R1A3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.69■□□□□ 0.9
Trdv4Q5R1A3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trdv4Q5R1A3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trdv4Q5R1A3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trdv4Q5R1A3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
Trdv4Q5R1A3 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.66■□□□□ 0.9
Trdv4Q5R1A3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trdv4Q5R1A3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trdv4Q5R1A3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Trdv4Q5R1A3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trdv4Q5R1A3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trdv4Q5R1A3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trdv4Q5R1A3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trdv4Q5R1A3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trdv4Q5R1A3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trdv4Q5R1A3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trdv4Q5R1A3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trdv4Q5R1A3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trdv4Q5R1A3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Trdv4Q5R1A3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trdv4Q5R1A3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trdv4Q5R1A3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trdv4Q5R1A3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trdv4Q5R1A3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Trdv4Q5R1A3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trdv4Q5R1A3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trdv4Q5R1A3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.54■□□□□ 0.88
Trdv4Q5R1A3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trdv4Q5R1A3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trdv4Q5R1A3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trdv4Q5R1A3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trdv4Q5R1A3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trdv4Q5R1A3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trdv4Q5R1A3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Trdv4Q5R1A3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trdv4Q5R1A3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trdv4Q5R1A3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trdv4Q5R1A3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trdv4Q5R1A3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Trdv4Q5R1A3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms