Protein–RNA interactions for Protein: Q3UYV9

Ncbp1, Nuclear cap-binding protein subunit 1, mousemouse

Known RBP Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ncbp1Q3UYV9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ncbp1Q3UYV9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ncbp1Q3UYV9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
Ncbp1Q3UYV9 Gm9397-201ENSMUST00000200125 605 ntBASIC30.31■■■□□ 2.44
Ncbp1Q3UYV9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC30.31■■■□□ 2.44
Ncbp1Q3UYV9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Ncbp1Q3UYV9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ncbp1Q3UYV9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.29■■■□□ 2.44
Ncbp1Q3UYV9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
Ncbp1Q3UYV9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.29■■■□□ 2.44
Ncbp1Q3UYV9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
Ncbp1Q3UYV9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Ncbp1Q3UYV9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Ncbp1Q3UYV9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
Ncbp1Q3UYV9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Ncbp1Q3UYV9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.26■■■□□ 2.43
Ncbp1Q3UYV9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
Ncbp1Q3UYV9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.24■■■□□ 2.43
Ncbp1Q3UYV9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Ncbp1Q3UYV9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
Ncbp1Q3UYV9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
Ncbp1Q3UYV9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30.21■■■□□ 2.43
Ncbp1Q3UYV9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Ncbp1Q3UYV9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30.2■■■□□ 2.43
Ncbp1Q3UYV9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.18■■■□□ 2.42
Ncbp1Q3UYV9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ncbp1Q3UYV9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Ncbp1Q3UYV9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.16■■■□□ 2.42
Ncbp1Q3UYV9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Ncbp1Q3UYV9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.15■■■□□ 2.42
Ncbp1Q3UYV9 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.15■■■□□ 2.42
Ncbp1Q3UYV9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Ncbp1Q3UYV9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ncbp1Q3UYV9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
Ncbp1Q3UYV9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
Ncbp1Q3UYV9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.11■■■□□ 2.41
Ncbp1Q3UYV9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC30.11■■■□□ 2.41
Ncbp1Q3UYV9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.1■■■□□ 2.41
Ncbp1Q3UYV9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Ncbp1Q3UYV9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
Ncbp1Q3UYV9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.09■■■□□ 2.41
Ncbp1Q3UYV9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Ncbp1Q3UYV9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC30.08■■■□□ 2.41
Ncbp1Q3UYV9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Ncbp1Q3UYV9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
Ncbp1Q3UYV9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ncbp1Q3UYV9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
Ncbp1Q3UYV9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.05■■■□□ 2.4
Ncbp1Q3UYV9 Gm24970-201ENSMUST00000175582 82 ntBASIC30.05■■■□□ 2.4
Ncbp1Q3UYV9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ncbp1Q3UYV9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ncbp1Q3UYV9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ncbp1Q3UYV9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Ncbp1Q3UYV9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Ncbp1Q3UYV9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Ncbp1Q3UYV9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Ncbp1Q3UYV9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30.02■■■□□ 2.4
Ncbp1Q3UYV9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Ncbp1Q3UYV9 Zxda-201ENSMUST00000117281 2621 ntBASIC30■■■□□ 2.39
Ncbp1Q3UYV9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Ncbp1Q3UYV9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Ncbp1Q3UYV9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
Ncbp1Q3UYV9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ncbp1Q3UYV9 Gm6658-202ENSMUST00000209493 1885 ntBASIC29.96■■■□□ 2.39
Ncbp1Q3UYV9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Ncbp1Q3UYV9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.39
Ncbp1Q3UYV9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC29.95■■■□□ 2.39
Ncbp1Q3UYV9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC29.93■■■□□ 2.38
Ncbp1Q3UYV9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Ncbp1Q3UYV9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Ncbp1Q3UYV9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
Ncbp1Q3UYV9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC29.87■■■□□ 2.37
Ncbp1Q3UYV9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Ncbp1Q3UYV9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Ncbp1Q3UYV9 Gm43863-201ENSMUST00000203822 1192 ntBASIC29.83■■■□□ 2.37
Ncbp1Q3UYV9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC29.82■■■□□ 2.36
Ncbp1Q3UYV9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Ncbp1Q3UYV9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Ncbp1Q3UYV9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Ncbp1Q3UYV9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC29.81■■■□□ 2.36
Ncbp1Q3UYV9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Ncbp1Q3UYV9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Ncbp1Q3UYV9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Ncbp1Q3UYV9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Ncbp1Q3UYV9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Ncbp1Q3UYV9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
Ncbp1Q3UYV9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Ncbp1Q3UYV9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Ncbp1Q3UYV9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Ncbp1Q3UYV9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Ncbp1Q3UYV9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29.76■■■□□ 2.35
Ncbp1Q3UYV9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Ncbp1Q3UYV9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Ncbp1Q3UYV9 Gm30346-201ENSMUST00000218641 1699 ntBASIC29.72■■■□□ 2.35
Ncbp1Q3UYV9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Ncbp1Q3UYV9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
Ncbp1Q3UYV9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
Ncbp1Q3UYV9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Ncbp1Q3UYV9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC29.68■■■□□ 2.34
Ncbp1Q3UYV9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC29.68■■■□□ 2.34
Retrieved 100 of 76,532 protein–RNA pairs in 193.1 ms