Protein–RNA interactions for Protein: Q3UHC1

Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, mousemouse

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef1Q3UHC1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.54■■■□□ 2
Rapgef1Q3UHC1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.54■■■□□ 2
Rapgef1Q3UHC1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Rapgef1Q3UHC1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
Rapgef1Q3UHC1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
Rapgef1Q3UHC1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.51■■□□□ 1.99
Rapgef1Q3UHC1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.49■■□□□ 1.99
Rapgef1Q3UHC1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Rapgef1Q3UHC1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Rapgef1Q3UHC1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Rapgef1Q3UHC1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
Rapgef1Q3UHC1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.45■■□□□ 1.99
Rapgef1Q3UHC1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Rapgef1Q3UHC1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC27.44■■□□□ 1.98
Rapgef1Q3UHC1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Rapgef1Q3UHC1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
Rapgef1Q3UHC1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Rapgef1Q3UHC1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Rapgef1Q3UHC1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Rapgef1Q3UHC1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Rapgef1Q3UHC1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Rapgef1Q3UHC1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC27.41■■□□□ 1.98
Rapgef1Q3UHC1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Rapgef1Q3UHC1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
Rapgef1Q3UHC1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Rapgef1Q3UHC1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.36■■□□□ 1.97
Rapgef1Q3UHC1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27.36■■□□□ 1.97
Rapgef1Q3UHC1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Rapgef1Q3UHC1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
Rapgef1Q3UHC1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.33■■□□□ 1.97
Rapgef1Q3UHC1 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.33■■□□□ 1.97
Rapgef1Q3UHC1 Zxda-201ENSMUST00000117281 2621 ntBASIC27.32■■□□□ 1.96
Rapgef1Q3UHC1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Rapgef1Q3UHC1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rapgef1Q3UHC1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rapgef1Q3UHC1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
Rapgef1Q3UHC1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
Rapgef1Q3UHC1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
Rapgef1Q3UHC1 Gm6206-201ENSMUST00000133472 2199 ntBASIC27.26■■□□□ 1.96
Rapgef1Q3UHC1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC27.26■■□□□ 1.95
Rapgef1Q3UHC1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
Rapgef1Q3UHC1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Rapgef1Q3UHC1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Rapgef1Q3UHC1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.25■■□□□ 1.95
Rapgef1Q3UHC1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Rapgef1Q3UHC1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Rapgef1Q3UHC1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Rapgef1Q3UHC1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Rapgef1Q3UHC1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
Rapgef1Q3UHC1 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.22■■□□□ 1.95
Rapgef1Q3UHC1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Rapgef1Q3UHC1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Rapgef1Q3UHC1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27.19■■□□□ 1.94
Rapgef1Q3UHC1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rapgef1Q3UHC1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rapgef1Q3UHC1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rapgef1Q3UHC1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rapgef1Q3UHC1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.16■■□□□ 1.94
Rapgef1Q3UHC1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Rapgef1Q3UHC1 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.16■■□□□ 1.94
Rapgef1Q3UHC1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rapgef1Q3UHC1 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.15■■□□□ 1.94
Rapgef1Q3UHC1 Gm30346-201ENSMUST00000218641 1699 ntBASIC27.15■■□□□ 1.94
Rapgef1Q3UHC1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Rapgef1Q3UHC1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
Rapgef1Q3UHC1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Rapgef1Q3UHC1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.14■■□□□ 1.94
Rapgef1Q3UHC1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
Rapgef1Q3UHC1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rapgef1Q3UHC1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Rapgef1Q3UHC1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rapgef1Q3UHC1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
Rapgef1Q3UHC1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Rapgef1Q3UHC1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Rapgef1Q3UHC1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rapgef1Q3UHC1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Rapgef1Q3UHC1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rapgef1Q3UHC1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rapgef1Q3UHC1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Rapgef1Q3UHC1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Rapgef1Q3UHC1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC27.05■■□□□ 1.92
Rapgef1Q3UHC1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Rapgef1Q3UHC1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
Rapgef1Q3UHC1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
Rapgef1Q3UHC1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
Rapgef1Q3UHC1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Rapgef1Q3UHC1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Rapgef1Q3UHC1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Rapgef1Q3UHC1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC27■■□□□ 1.91
Rapgef1Q3UHC1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
Rapgef1Q3UHC1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Rapgef1Q3UHC1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Rapgef1Q3UHC1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Rapgef1Q3UHC1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Rapgef1Q3UHC1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.97■■□□□ 1.91
Rapgef1Q3UHC1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Rapgef1Q3UHC1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.91
Rapgef1Q3UHC1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.93■■□□□ 1.9
Rapgef1Q3UHC1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rapgef1Q3UHC1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms