Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Col5a2Q3U962 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Col5a2Q3U962 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Col5a2Q3U962 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Col5a2Q3U962 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.52■■■□□ 2.64
Col5a2Q3U962 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC31.52■■■□□ 2.64
Col5a2Q3U962 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Col5a2Q3U962 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC31.47■■■□□ 2.63
Col5a2Q3U962 Gm43863-201ENSMUST00000203822 1192 ntBASIC31.46■■■□□ 2.63
Col5a2Q3U962 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Col5a2Q3U962 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Col5a2Q3U962 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
Col5a2Q3U962 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
Col5a2Q3U962 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Col5a2Q3U962 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
Col5a2Q3U962 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
Col5a2Q3U962 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
Col5a2Q3U962 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Col5a2Q3U962 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Col5a2Q3U962 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Col5a2Q3U962 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Col5a2Q3U962 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
Col5a2Q3U962 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Col5a2Q3U962 Gm42809-201ENSMUST00000198429 1138 ntBASIC31.33■■■□□ 2.61
Col5a2Q3U962 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.31■■■□□ 2.6
Col5a2Q3U962 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Col5a2Q3U962 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Col5a2Q3U962 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC31.3■■■□□ 2.6
Col5a2Q3U962 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Col5a2Q3U962 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC31.29■■■□□ 2.6
Col5a2Q3U962 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
Col5a2Q3U962 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Col5a2Q3U962 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Col5a2Q3U962 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Col5a2Q3U962 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Col5a2Q3U962 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
Col5a2Q3U962 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Col5a2Q3U962 AC157572.2-201ENSMUST00000226970 908 ntBASIC31.22■■■□□ 2.59
Col5a2Q3U962 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Col5a2Q3U962 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Col5a2Q3U962 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC31.18■■■□□ 2.58
Col5a2Q3U962 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Col5a2Q3U962 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Col5a2Q3U962 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31.15■■■□□ 2.58
Col5a2Q3U962 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
Col5a2Q3U962 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Col5a2Q3U962 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31.08■■■□□ 2.57
Col5a2Q3U962 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC31.07■■■□□ 2.56
Col5a2Q3U962 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Col5a2Q3U962 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Col5a2Q3U962 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC31.06■■■□□ 2.56
Col5a2Q3U962 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Col5a2Q3U962 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC31.04■■■□□ 2.56
Col5a2Q3U962 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
Col5a2Q3U962 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Col5a2Q3U962 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
Col5a2Q3U962 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC31■■■□□ 2.55
Col5a2Q3U962 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC31■■■□□ 2.55
Col5a2Q3U962 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Col5a2Q3U962 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Col5a2Q3U962 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC30.97■■■□□ 2.55
Col5a2Q3U962 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Col5a2Q3U962 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
Col5a2Q3U962 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Col5a2Q3U962 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.55
Col5a2Q3U962 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.54
Col5a2Q3U962 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC30.94■■■□□ 2.54
Col5a2Q3U962 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Col5a2Q3U962 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
Col5a2Q3U962 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Col5a2Q3U962 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Col5a2Q3U962 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Col5a2Q3U962 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Col5a2Q3U962 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
Col5a2Q3U962 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Col5a2Q3U962 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Col5a2Q3U962 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
Col5a2Q3U962 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC30.89■■■□□ 2.54
Col5a2Q3U962 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC30.89■■■□□ 2.53
Col5a2Q3U962 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
Col5a2Q3U962 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Col5a2Q3U962 Nkain2-201ENSMUST00000092602 558 ntBASIC30.87■■■□□ 2.53
Col5a2Q3U962 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Col5a2Q3U962 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC30.86■■■□□ 2.53
Col5a2Q3U962 Gm7432-201ENSMUST00000210343 879 ntBASIC30.84■■■□□ 2.53
Col5a2Q3U962 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Col5a2Q3U962 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC30.82■■■□□ 2.53
Col5a2Q3U962 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.53
Col5a2Q3U962 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Col5a2Q3U962 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC30.82■■■□□ 2.52
Col5a2Q3U962 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC30.81■■■□□ 2.52
Col5a2Q3U962 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
Col5a2Q3U962 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Col5a2Q3U962 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Col5a2Q3U962 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Col5a2Q3U962 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC30.77■■■□□ 2.52
Col5a2Q3U962 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Col5a2Q3U962 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Col5a2Q3U962 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
Col5a2Q3U962 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms