Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.26■□□□□ 0.99
Cln6Q3U466 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Cln6Q3U466 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cln6Q3U466 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cln6Q3U466 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Cln6Q3U466 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cln6Q3U466 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cln6Q3U466 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cln6Q3U466 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cln6Q3U466 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cln6Q3U466 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cln6Q3U466 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.21■□□□□ 0.99
Cln6Q3U466 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cln6Q3U466 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cln6Q3U466 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
Cln6Q3U466 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cln6Q3U466 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cln6Q3U466 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cln6Q3U466 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cln6Q3U466 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
Cln6Q3U466 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.14■□□□□ 0.98
Cln6Q3U466 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Cln6Q3U466 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.13■□□□□ 0.97
Cln6Q3U466 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cln6Q3U466 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cln6Q3U466 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cln6Q3U466 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cln6Q3U466 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cln6Q3U466 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.11■□□□□ 0.97
Cln6Q3U466 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cln6Q3U466 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cln6Q3U466 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cln6Q3U466 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cln6Q3U466 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cln6Q3U466 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cln6Q3U466 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cln6Q3U466 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cln6Q3U466 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Cln6Q3U466 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Cln6Q3U466 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cln6Q3U466 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cln6Q3U466 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cln6Q3U466 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cln6Q3U466 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.06■□□□□ 0.96
Cln6Q3U466 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Cln6Q3U466 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cln6Q3U466 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cln6Q3U466 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cln6Q3U466 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cln6Q3U466 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cln6Q3U466 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cln6Q3U466 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cln6Q3U466 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cln6Q3U466 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cln6Q3U466 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cln6Q3U466 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cln6Q3U466 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
Cln6Q3U466 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.99■□□□□ 0.95
Cln6Q3U466 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cln6Q3U466 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cln6Q3U466 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.98■□□□□ 0.95
Cln6Q3U466 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.98■□□□□ 0.95
Cln6Q3U466 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Cln6Q3U466 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Cln6Q3U466 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cln6Q3U466 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cln6Q3U466 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.96■□□□□ 0.95
Cln6Q3U466 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
Cln6Q3U466 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cln6Q3U466 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cln6Q3U466 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cln6Q3U466 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cln6Q3U466 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cln6Q3U466 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cln6Q3U466 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cln6Q3U466 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cln6Q3U466 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cln6Q3U466 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cln6Q3U466 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Cln6Q3U466 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cln6Q3U466 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cln6Q3U466 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cln6Q3U466 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cln6Q3U466 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.88■□□□□ 0.93
Cln6Q3U466 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cln6Q3U466 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cln6Q3U466 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cln6Q3U466 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cln6Q3U466 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cln6Q3U466 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cln6Q3U466 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cln6Q3U466 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cln6Q3U466 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Cln6Q3U466 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
Cln6Q3U466 Gm26115-201ENSMUST00000175605 87 ntBASIC20.84■□□□□ 0.93
Cln6Q3U466 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cln6Q3U466 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Cln6Q3U466 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cln6Q3U466 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cln6Q3U466 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms