Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Fndc4Q3TR08 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Fndc4Q3TR08 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Fndc4Q3TR08 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Fndc4Q3TR08 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Fndc4Q3TR08 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Fndc4Q3TR08 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Fndc4Q3TR08 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Fndc4Q3TR08 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Fndc4Q3TR08 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Fndc4Q3TR08 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Fndc4Q3TR08 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Fndc4Q3TR08 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Fndc4Q3TR08 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Fndc4Q3TR08 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Fndc4Q3TR08 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Fndc4Q3TR08 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Fndc4Q3TR08 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Fndc4Q3TR08 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Fndc4Q3TR08 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Fndc4Q3TR08 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Fndc4Q3TR08 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.12■□□□□ 0.97
Fndc4Q3TR08 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Fndc4Q3TR08 Amer2-203ENSMUST00000225247 2662 ntBASIC21.12■□□□□ 0.97
Fndc4Q3TR08 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Fndc4Q3TR08 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Fndc4Q3TR08 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Fndc4Q3TR08 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Fndc4Q3TR08 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Fndc4Q3TR08 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Fndc4Q3TR08 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Fndc4Q3TR08 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Fndc4Q3TR08 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Fndc4Q3TR08 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Fndc4Q3TR08 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.06■□□□□ 0.96
Fndc4Q3TR08 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fndc4Q3TR08 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fndc4Q3TR08 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Fndc4Q3TR08 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fndc4Q3TR08 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Fndc4Q3TR08 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
Fndc4Q3TR08 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Fndc4Q3TR08 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
Fndc4Q3TR08 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Fndc4Q3TR08 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Fndc4Q3TR08 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Fndc4Q3TR08 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fndc4Q3TR08 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fndc4Q3TR08 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21■□□□□ 0.95
Fndc4Q3TR08 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fndc4Q3TR08 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fndc4Q3TR08 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Fndc4Q3TR08 Gm24804-201ENSMUST00000174982 85 ntBASIC20.98■□□□□ 0.95
Fndc4Q3TR08 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Fndc4Q3TR08 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Fndc4Q3TR08 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.97■□□□□ 0.95
Fndc4Q3TR08 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fndc4Q3TR08 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.97■□□□□ 0.95
Fndc4Q3TR08 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fndc4Q3TR08 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Fndc4Q3TR08 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Fndc4Q3TR08 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fndc4Q3TR08 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fndc4Q3TR08 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Fndc4Q3TR08 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Fndc4Q3TR08 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fndc4Q3TR08 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Fndc4Q3TR08 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Fndc4Q3TR08 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Fndc4Q3TR08 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fndc4Q3TR08 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fndc4Q3TR08 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.92■□□□□ 0.94
Fndc4Q3TR08 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fndc4Q3TR08 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fndc4Q3TR08 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Fndc4Q3TR08 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fndc4Q3TR08 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Fndc4Q3TR08 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fndc4Q3TR08 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Fndc4Q3TR08 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Fndc4Q3TR08 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Fndc4Q3TR08 Peli2-204ENSMUST00000226513 1320 ntBASIC20.88■□□□□ 0.93
Fndc4Q3TR08 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Fndc4Q3TR08 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.86■□□□□ 0.93
Fndc4Q3TR08 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Fndc4Q3TR08 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Fndc4Q3TR08 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Fndc4Q3TR08 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Fndc4Q3TR08 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.84■□□□□ 0.93
Fndc4Q3TR08 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Fndc4Q3TR08 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Fndc4Q3TR08 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Fndc4Q3TR08 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Fndc4Q3TR08 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Fndc4Q3TR08 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Fndc4Q3TR08 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Fndc4Q3TR08 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.82■□□□□ 0.92
Fndc4Q3TR08 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Fndc4Q3TR08 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Fndc4Q3TR08 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms