Protein–RNA interactions for Protein: P84444

Ccl21a, C-C motif chemokine 21a, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21aP84444 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Ccl21aP84444 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.98■■□□□ 1.11
Ccl21aP84444 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Ccl21aP84444 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ccl21aP84444 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ccl21aP84444 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ccl21aP84444 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ccl21aP84444 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccl21aP84444 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ccl21aP84444 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.89■■□□□ 1.09
Ccl21aP84444 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Ccl21aP84444 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.88■■□□□ 1.09
Ccl21aP84444 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccl21aP84444 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Ccl21aP84444 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ccl21aP84444 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Ccl21aP84444 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Ccl21aP84444 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ccl21aP84444 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.84■■□□□ 1.09
Ccl21aP84444 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ccl21aP84444 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ccl21aP84444 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccl21aP84444 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.82■■□□□ 1.08
Ccl21aP84444 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ccl21aP84444 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.8■■□□□ 1.08
Ccl21aP84444 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ccl21aP84444 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.79■■□□□ 1.08
Ccl21aP84444 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.78■■□□□ 1.08
Ccl21aP84444 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccl21aP84444 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Ccl21aP84444 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccl21aP84444 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccl21aP84444 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccl21aP84444 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccl21aP84444 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccl21aP84444 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccl21aP84444 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccl21aP84444 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.74■■□□□ 1.07
Ccl21aP84444 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccl21aP84444 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
Ccl21aP84444 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Ccl21aP84444 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.71■■□□□ 1.07
Ccl21aP84444 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.71■■□□□ 1.07
Ccl21aP84444 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
Ccl21aP84444 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccl21aP84444 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.69■■□□□ 1.06
Ccl21aP84444 Gm7432-201ENSMUST00000210343 879 ntBASIC21.69■■□□□ 1.06
Ccl21aP84444 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ccl21aP84444 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccl21aP84444 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Ccl21aP84444 Nkain2-201ENSMUST00000092602 558 ntBASIC21.67■■□□□ 1.06
Ccl21aP84444 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccl21aP84444 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccl21aP84444 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccl21aP84444 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccl21aP84444 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Ccl21aP84444 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.65■■□□□ 1.06
Ccl21aP84444 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ccl21aP84444 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Ccl21aP84444 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccl21aP84444 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccl21aP84444 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccl21aP84444 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ccl21aP84444 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccl21aP84444 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccl21aP84444 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.59■■□□□ 1.05
Ccl21aP84444 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ccl21aP84444 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccl21aP84444 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccl21aP84444 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.56■■□□□ 1.04
Ccl21aP84444 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccl21aP84444 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Ccl21aP84444 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ccl21aP84444 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.55■■□□□ 1.04
Ccl21aP84444 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccl21aP84444 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccl21aP84444 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Ccl21aP84444 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ccl21aP84444 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Ccl21aP84444 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ccl21aP84444 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.53■■□□□ 1.04
Ccl21aP84444 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccl21aP84444 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccl21aP84444 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccl21aP84444 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccl21aP84444 Gm11599-201ENSMUST00000118720 878 ntBASIC21.51■■□□□ 1.03
Ccl21aP84444 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
Ccl21aP84444 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.5■■□□□ 1.03
Ccl21aP84444 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccl21aP84444 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccl21aP84444 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ccl21aP84444 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Ccl21aP84444 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ccl21aP84444 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccl21aP84444 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ccl21aP84444 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ccl21aP84444 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ccl21aP84444 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccl21aP84444 Mir6538-201ENSMUST00000183713 110 ntBASIC21.46■■□□□ 1.03
Ccl21aP84444 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms