Protein–RNA interactions for Protein: P63044

Vamp2, Vesicle-associated membrane protein 2, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp2P63044 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vamp2P63044 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vamp2P63044 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.87■□□□□ 0.93
Vamp2P63044 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Vamp2P63044 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vamp2P63044 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vamp2P63044 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vamp2P63044 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vamp2P63044 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Vamp2P63044 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vamp2P63044 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Vamp2P63044 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vamp2P63044 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Vamp2P63044 Mipep-204ENSMUST00000225043 1548 ntBASIC20.82■□□□□ 0.92
Vamp2P63044 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vamp2P63044 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Vamp2P63044 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vamp2P63044 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vamp2P63044 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vamp2P63044 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vamp2P63044 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vamp2P63044 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Vamp2P63044 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vamp2P63044 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Vamp2P63044 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Vamp2P63044 Rab21-202ENSMUST00000218831 843 ntBASIC20.78■□□□□ 0.92
Vamp2P63044 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Vamp2P63044 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vamp2P63044 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vamp2P63044 Amer2-203ENSMUST00000225247 2662 ntBASIC20.75■□□□□ 0.91
Vamp2P63044 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vamp2P63044 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
Vamp2P63044 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vamp2P63044 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vamp2P63044 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vamp2P63044 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vamp2P63044 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vamp2P63044 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vamp2P63044 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vamp2P63044 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vamp2P63044 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Vamp2P63044 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vamp2P63044 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Vamp2P63044 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vamp2P63044 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vamp2P63044 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.66■□□□□ 0.9
Vamp2P63044 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vamp2P63044 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.65■□□□□ 0.9
Vamp2P63044 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vamp2P63044 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vamp2P63044 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Vamp2P63044 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vamp2P63044 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.62■□□□□ 0.89
Vamp2P63044 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.62■□□□□ 0.89
Vamp2P63044 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vamp2P63044 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vamp2P63044 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vamp2P63044 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Vamp2P63044 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.59■□□□□ 0.89
Vamp2P63044 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vamp2P63044 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vamp2P63044 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.58■□□□□ 0.88
Vamp2P63044 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vamp2P63044 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Vamp2P63044 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Vamp2P63044 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.55■□□□□ 0.88
Vamp2P63044 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Vamp2P63044 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vamp2P63044 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vamp2P63044 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vamp2P63044 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vamp2P63044 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.53■□□□□ 0.88
Vamp2P63044 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vamp2P63044 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vamp2P63044 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vamp2P63044 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vamp2P63044 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vamp2P63044 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vamp2P63044 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vamp2P63044 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.49■□□□□ 0.87
Vamp2P63044 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Vamp2P63044 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Vamp2P63044 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Vamp2P63044 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vamp2P63044 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vamp2P63044 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vamp2P63044 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vamp2P63044 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vamp2P63044 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vamp2P63044 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vamp2P63044 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vamp2P63044 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vamp2P63044 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.45■□□□□ 0.86
Vamp2P63044 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vamp2P63044 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vamp2P63044 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vamp2P63044 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vamp2P63044 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Vamp2P63044 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vamp2P63044 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms