Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Lrch1P62046 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Lrch1P62046 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Lrch1P62046 Gm43863-201ENSMUST00000203822 1192 ntBASIC31.05■■■□□ 2.56
Lrch1P62046 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Lrch1P62046 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
Lrch1P62046 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Lrch1P62046 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
Lrch1P62046 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Lrch1P62046 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Lrch1P62046 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Lrch1P62046 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
Lrch1P62046 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC30.95■■■□□ 2.55
Lrch1P62046 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Lrch1P62046 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
Lrch1P62046 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Lrch1P62046 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
Lrch1P62046 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC30.94■■■□□ 2.54
Lrch1P62046 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Lrch1P62046 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Lrch1P62046 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30.9■■■□□ 2.54
Lrch1P62046 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Lrch1P62046 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Lrch1P62046 Gm42809-201ENSMUST00000198429 1138 ntBASIC30.84■■■□□ 2.53
Lrch1P62046 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.82■■■□□ 2.53
Lrch1P62046 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Lrch1P62046 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
Lrch1P62046 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
Lrch1P62046 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Lrch1P62046 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC30.78■■■□□ 2.52
Lrch1P62046 AC157572.2-201ENSMUST00000226970 908 ntBASIC30.78■■■□□ 2.52
Lrch1P62046 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.51
Lrch1P62046 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Lrch1P62046 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Lrch1P62046 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Lrch1P62046 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC30.73■■■□□ 2.51
Lrch1P62046 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Lrch1P62046 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30.73■■■□□ 2.51
Lrch1P62046 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.73■■■□□ 2.51
Lrch1P62046 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Lrch1P62046 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Lrch1P62046 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30.7■■■□□ 2.51
Lrch1P62046 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Lrch1P62046 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Lrch1P62046 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Lrch1P62046 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Lrch1P62046 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
Lrch1P62046 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC30.62■■■□□ 2.49
Lrch1P62046 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Lrch1P62046 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Lrch1P62046 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Lrch1P62046 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Lrch1P62046 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC30.6■■■□□ 2.49
Lrch1P62046 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Lrch1P62046 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC30.58■■■□□ 2.49
Lrch1P62046 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
Lrch1P62046 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC30.58■■■□□ 2.49
Lrch1P62046 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Lrch1P62046 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Lrch1P62046 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
Lrch1P62046 Nkain2-201ENSMUST00000092602 558 ntBASIC30.55■■■□□ 2.48
Lrch1P62046 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Lrch1P62046 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Lrch1P62046 Gm7432-201ENSMUST00000210343 879 ntBASIC30.53■■■□□ 2.48
Lrch1P62046 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
Lrch1P62046 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Lrch1P62046 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
Lrch1P62046 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
Lrch1P62046 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
Lrch1P62046 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
Lrch1P62046 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC30.5■■■□□ 2.47
Lrch1P62046 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Lrch1P62046 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
Lrch1P62046 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.48■■■□□ 2.47
Lrch1P62046 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Lrch1P62046 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Lrch1P62046 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Lrch1P62046 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC30.45■■■□□ 2.47
Lrch1P62046 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.45■■■□□ 2.46
Lrch1P62046 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC30.42■■■□□ 2.46
Lrch1P62046 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Lrch1P62046 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30.41■■■□□ 2.46
Lrch1P62046 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC30.39■■■□□ 2.46
Lrch1P62046 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Lrch1P62046 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
Lrch1P62046 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Lrch1P62046 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Lrch1P62046 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
Lrch1P62046 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Lrch1P62046 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Lrch1P62046 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC30.36■■■□□ 2.45
Lrch1P62046 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Lrch1P62046 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Lrch1P62046 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC30.35■■■□□ 2.45
Lrch1P62046 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Lrch1P62046 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Lrch1P62046 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Lrch1P62046 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.33■■■□□ 2.45
Lrch1P62046 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Lrch1P62046 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC30.3■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms