Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Xcl1P47993 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Xcl1P47993 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Xcl1P47993 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Xcl1P47993 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Xcl1P47993 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Xcl1P47993 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Xcl1P47993 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Xcl1P47993 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.61■□□□□ 0.25
Xcl1P47993 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Xcl1P47993 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Xcl1P47993 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Xcl1P47993 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Xcl1P47993 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Xcl1P47993 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Xcl1P47993 Fezf2-202ENSMUST00000224023 1917 ntBASIC16.58■□□□□ 0.24
Xcl1P47993 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Xcl1P47993 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Xcl1P47993 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Xcl1P47993 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Xcl1P47993 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.55■□□□□ 0.24
Xcl1P47993 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Xcl1P47993 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Xcl1P47993 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Xcl1P47993 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Xcl1P47993 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Xcl1P47993 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Xcl1P47993 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Xcl1P47993 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Xcl1P47993 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Xcl1P47993 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Xcl1P47993 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Xcl1P47993 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Xcl1P47993 Amer2-203ENSMUST00000225247 2662 ntBASIC16.49■□□□□ 0.23
Xcl1P47993 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Xcl1P47993 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC16.49■□□□□ 0.23
Xcl1P47993 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Xcl1P47993 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Xcl1P47993 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Xcl1P47993 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Xcl1P47993 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Xcl1P47993 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Xcl1P47993 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Xcl1P47993 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Xcl1P47993 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Xcl1P47993 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Xcl1P47993 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
Xcl1P47993 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Xcl1P47993 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Xcl1P47993 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Xcl1P47993 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Xcl1P47993 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Xcl1P47993 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xcl1P47993 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Xcl1P47993 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Xcl1P47993 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xcl1P47993 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Xcl1P47993 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Xcl1P47993 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xcl1P47993 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Xcl1P47993 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC16.42■□□□□ 0.22
Xcl1P47993 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Xcl1P47993 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Xcl1P47993 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Xcl1P47993 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Xcl1P47993 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Xcl1P47993 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Xcl1P47993 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Xcl1P47993 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Xcl1P47993 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Xcl1P47993 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Xcl1P47993 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Xcl1P47993 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Xcl1P47993 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Xcl1P47993 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC16.38■□□□□ 0.21
Xcl1P47993 AC153890.1-201ENSMUST00000220021 2469 ntBASIC16.38■□□□□ 0.21
Xcl1P47993 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Xcl1P47993 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Xcl1P47993 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Xcl1P47993 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Xcl1P47993 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Xcl1P47993 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Xcl1P47993 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Xcl1P47993 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Xcl1P47993 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Xcl1P47993 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Xcl1P47993 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Xcl1P47993 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.33■□□□□ 0.2
Xcl1P47993 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Xcl1P47993 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Xcl1P47993 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Xcl1P47993 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Xcl1P47993 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Xcl1P47993 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Xcl1P47993 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Xcl1P47993 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Xcl1P47993 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Xcl1P47993 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Xcl1P47993 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Xcl1P47993 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms