Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Sox18P43680 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Sox18P43680 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Sox18P43680 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sox18P43680 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Sox18P43680 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.68■■□□□ 1.54
Sox18P43680 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.67■■□□□ 1.54
Sox18P43680 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Sox18P43680 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Sox18P43680 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Sox18P43680 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Sox18P43680 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Sox18P43680 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Sox18P43680 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.62■■□□□ 1.53
Sox18P43680 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Sox18P43680 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
Sox18P43680 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Sox18P43680 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.6■■□□□ 1.53
Sox18P43680 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Sox18P43680 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Sox18P43680 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Sox18P43680 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.56■■□□□ 1.52
Sox18P43680 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Sox18P43680 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Sox18P43680 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
Sox18P43680 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Sox18P43680 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.53■■□□□ 1.52
Sox18P43680 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Sox18P43680 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.51■■□□□ 1.51
Sox18P43680 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.51■■□□□ 1.51
Sox18P43680 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Sox18P43680 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Sox18P43680 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.5■■□□□ 1.51
Sox18P43680 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.49■■□□□ 1.51
Sox18P43680 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Sox18P43680 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
Sox18P43680 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.47■■□□□ 1.51
Sox18P43680 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Sox18P43680 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Sox18P43680 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Sox18P43680 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.46■■□□□ 1.51
Sox18P43680 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Sox18P43680 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Sox18P43680 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Sox18P43680 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Sox18P43680 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Sox18P43680 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Sox18P43680 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.43■■□□□ 1.5
Sox18P43680 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
Sox18P43680 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Sox18P43680 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Sox18P43680 Gm7432-201ENSMUST00000210343 879 ntBASIC24.38■■□□□ 1.49
Sox18P43680 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.38■■□□□ 1.49
Sox18P43680 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Sox18P43680 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Sox18P43680 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Sox18P43680 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Sox18P43680 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Sox18P43680 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Sox18P43680 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Sox18P43680 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.32■■□□□ 1.48
Sox18P43680 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.31■■□□□ 1.48
Sox18P43680 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.31■■□□□ 1.48
Sox18P43680 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Sox18P43680 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Sox18P43680 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Sox18P43680 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Sox18P43680 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.29■■□□□ 1.48
Sox18P43680 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Sox18P43680 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Sox18P43680 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Sox18P43680 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sox18P43680 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Sox18P43680 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sox18P43680 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sox18P43680 Nkain2-201ENSMUST00000092602 558 ntBASIC24.27■■□□□ 1.48
Sox18P43680 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.25■■□□□ 1.47
Sox18P43680 Mir6538-201ENSMUST00000183713 110 ntBASIC24.24■■□□□ 1.47
Sox18P43680 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sox18P43680 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
Sox18P43680 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
Sox18P43680 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Sox18P43680 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Sox18P43680 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Sox18P43680 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sox18P43680 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Sox18P43680 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.17■■□□□ 1.46
Sox18P43680 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Sox18P43680 Gm11599-201ENSMUST00000118720 878 ntBASIC24.16■■□□□ 1.46
Sox18P43680 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Sox18P43680 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Sox18P43680 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Sox18P43680 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.14■■□□□ 1.45
Sox18P43680 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Sox18P43680 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
Sox18P43680 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Sox18P43680 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Sox18P43680 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.11■■□□□ 1.45
Sox18P43680 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Sox18P43680 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms