Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Foxa1P35582 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.57■■□□□ 1.36
Foxa1P35582 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Foxa1P35582 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Foxa1P35582 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Foxa1P35582 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Foxa1P35582 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Foxa1P35582 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Foxa1P35582 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Foxa1P35582 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Foxa1P35582 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.54■■□□□ 1.36
Foxa1P35582 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.53■■□□□ 1.36
Foxa1P35582 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Foxa1P35582 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Foxa1P35582 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Foxa1P35582 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Foxa1P35582 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Foxa1P35582 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Foxa1P35582 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.5■■□□□ 1.35
Foxa1P35582 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
Foxa1P35582 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.48■■□□□ 1.35
Foxa1P35582 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Foxa1P35582 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Foxa1P35582 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Foxa1P35582 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Foxa1P35582 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Foxa1P35582 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Foxa1P35582 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.43■■□□□ 1.34
Foxa1P35582 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Foxa1P35582 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Foxa1P35582 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Foxa1P35582 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Foxa1P35582 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Foxa1P35582 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Foxa1P35582 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Foxa1P35582 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Foxa1P35582 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Foxa1P35582 Zfp131-205ENSMUST00000223812 663 ntBASIC23.39■■□□□ 1.33
Foxa1P35582 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.38■■□□□ 1.33
Foxa1P35582 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Foxa1P35582 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Foxa1P35582 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Foxa1P35582 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Foxa1P35582 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Foxa1P35582 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Foxa1P35582 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Foxa1P35582 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Foxa1P35582 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Foxa1P35582 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Foxa1P35582 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Foxa1P35582 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Foxa1P35582 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Foxa1P35582 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Foxa1P35582 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Foxa1P35582 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.27■■□□□ 1.32
Foxa1P35582 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.27■■□□□ 1.32
Foxa1P35582 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Foxa1P35582 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Foxa1P35582 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
Foxa1P35582 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Foxa1P35582 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Foxa1P35582 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Foxa1P35582 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.25■■□□□ 1.31
Foxa1P35582 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Foxa1P35582 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.24■■□□□ 1.31
Foxa1P35582 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Foxa1P35582 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Foxa1P35582 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.23■■□□□ 1.31
Foxa1P35582 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Foxa1P35582 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Foxa1P35582 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Foxa1P35582 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Foxa1P35582 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Foxa1P35582 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Foxa1P35582 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Foxa1P35582 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Foxa1P35582 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Foxa1P35582 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Foxa1P35582 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Foxa1P35582 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.15■■□□□ 1.3
Foxa1P35582 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Foxa1P35582 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Foxa1P35582 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Foxa1P35582 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Foxa1P35582 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Foxa1P35582 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.12■■□□□ 1.29
Foxa1P35582 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Foxa1P35582 Zxda-201ENSMUST00000117281 2621 ntBASIC23.12■■□□□ 1.29
Foxa1P35582 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Foxa1P35582 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Foxa1P35582 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Foxa1P35582 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Foxa1P35582 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Foxa1P35582 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Foxa1P35582 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.05■■□□□ 1.28
Foxa1P35582 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Foxa1P35582 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Foxa1P35582 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Foxa1P35582 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Foxa1P35582 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.02■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms