Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab5cP35278 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rab5cP35278 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab5cP35278 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab5cP35278 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rab5cP35278 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rab5cP35278 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rab5cP35278 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rab5cP35278 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rab5cP35278 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Rab5cP35278 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rab5cP35278 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rab5cP35278 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.48■□□□□ 0.87
Rab5cP35278 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rab5cP35278 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab5cP35278 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab5cP35278 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab5cP35278 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab5cP35278 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.45■□□□□ 0.86
Rab5cP35278 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab5cP35278 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.42■□□□□ 0.86
Rab5cP35278 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Rab5cP35278 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab5cP35278 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rab5cP35278 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rab5cP35278 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Rab5cP35278 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rab5cP35278 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Rab5cP35278 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rab5cP35278 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rab5cP35278 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rab5cP35278 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rab5cP35278 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Rab5cP35278 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rab5cP35278 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rab5cP35278 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.37■□□□□ 0.85
Rab5cP35278 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rab5cP35278 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.37■□□□□ 0.85
Rab5cP35278 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rab5cP35278 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rab5cP35278 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rab5cP35278 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rab5cP35278 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rab5cP35278 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rab5cP35278 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rab5cP35278 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rab5cP35278 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Rab5cP35278 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.32■□□□□ 0.84
Rab5cP35278 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rab5cP35278 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rab5cP35278 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rab5cP35278 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rab5cP35278 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rab5cP35278 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rab5cP35278 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rab5cP35278 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rab5cP35278 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rab5cP35278 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Rab5cP35278 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.26■□□□□ 0.83
Rab5cP35278 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab5cP35278 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab5cP35278 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.26■□□□□ 0.83
Rab5cP35278 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rab5cP35278 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab5cP35278 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rab5cP35278 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab5cP35278 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab5cP35278 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab5cP35278 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rab5cP35278 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.2■□□□□ 0.82
Rab5cP35278 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.2■□□□□ 0.82
Rab5cP35278 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rab5cP35278 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab5cP35278 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab5cP35278 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab5cP35278 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab5cP35278 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab5cP35278 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.17■□□□□ 0.82
Rab5cP35278 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab5cP35278 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Rab5cP35278 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rab5cP35278 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rab5cP35278 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rab5cP35278 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rab5cP35278 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab5cP35278 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab5cP35278 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.12■□□□□ 0.81
Rab5cP35278 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rab5cP35278 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.12■□□□□ 0.81
Rab5cP35278 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rab5cP35278 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rab5cP35278 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab5cP35278 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab5cP35278 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rab5cP35278 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rab5cP35278 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rab5cP35278 Mipep-204ENSMUST00000225043 1548 ntBASIC20.09■□□□□ 0.81
Rab5cP35278 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rab5cP35278 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Rab5cP35278 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms