Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SncaO55042 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
SncaO55042 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SncaO55042 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SncaO55042 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SncaO55042 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SncaO55042 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SncaO55042 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SncaO55042 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.65■□□□□ 0.9
SncaO55042 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
SncaO55042 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SncaO55042 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SncaO55042 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SncaO55042 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SncaO55042 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SncaO55042 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SncaO55042 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SncaO55042 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SncaO55042 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SncaO55042 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.59■□□□□ 0.89
SncaO55042 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SncaO55042 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SncaO55042 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SncaO55042 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SncaO55042 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.58■□□□□ 0.88
SncaO55042 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SncaO55042 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SncaO55042 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SncaO55042 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SncaO55042 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.56■□□□□ 0.88
SncaO55042 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SncaO55042 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
SncaO55042 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SncaO55042 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.54■□□□□ 0.88
SncaO55042 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.52■□□□□ 0.88
SncaO55042 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SncaO55042 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SncaO55042 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.87
SncaO55042 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SncaO55042 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SncaO55042 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SncaO55042 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.48■□□□□ 0.87
SncaO55042 Gm26115-201ENSMUST00000175605 87 ntBASIC20.48■□□□□ 0.87
SncaO55042 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SncaO55042 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SncaO55042 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SncaO55042 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.47■□□□□ 0.87
SncaO55042 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SncaO55042 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SncaO55042 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SncaO55042 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SncaO55042 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SncaO55042 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SncaO55042 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SncaO55042 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SncaO55042 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SncaO55042 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SncaO55042 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SncaO55042 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SncaO55042 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SncaO55042 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SncaO55042 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SncaO55042 Gm8109-201ENSMUST00000194076 746 ntBASIC20.42■□□□□ 0.86
SncaO55042 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.42■□□□□ 0.86
SncaO55042 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SncaO55042 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SncaO55042 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SncaO55042 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SncaO55042 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SncaO55042 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SncaO55042 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SncaO55042 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SncaO55042 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SncaO55042 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
SncaO55042 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SncaO55042 Peli2-204ENSMUST00000226513 1320 ntBASIC20.36■□□□□ 0.85
SncaO55042 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
SncaO55042 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SncaO55042 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SncaO55042 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SncaO55042 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SncaO55042 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
SncaO55042 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.34■□□□□ 0.85
SncaO55042 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SncaO55042 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SncaO55042 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SncaO55042 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SncaO55042 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SncaO55042 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SncaO55042 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SncaO55042 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SncaO55042 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SncaO55042 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SncaO55042 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SncaO55042 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SncaO55042 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SncaO55042 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SncaO55042 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SncaO55042 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SncaO55042 Amer2-203ENSMUST00000225247 2662 ntBASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 103.8 ms