Protein–RNA interactions for Protein: L7N248

Gm6871, Predicted gene 6871, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6871L7N248 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm6871L7N248 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm6871L7N248 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
Gm6871L7N248 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
Gm6871L7N248 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm6871L7N248 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.49■□□□□ 0.71
Gm6871L7N248 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm6871L7N248 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Gm6871L7N248 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm6871L7N248 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm6871L7N248 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm6871L7N248 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gm6871L7N248 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gm6871L7N248 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Gm6871L7N248 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm6871L7N248 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm6871L7N248 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Gm6871L7N248 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.46■□□□□ 0.71
Gm6871L7N248 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.45■□□□□ 0.7
Gm6871L7N248 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm6871L7N248 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm6871L7N248 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.44■□□□□ 0.7
Gm6871L7N248 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm6871L7N248 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm6871L7N248 Peli2-204ENSMUST00000226513 1320 ntBASIC19.44■□□□□ 0.7
Gm6871L7N248 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Gm6871L7N248 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm6871L7N248 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Gm6871L7N248 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm6871L7N248 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm6871L7N248 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm6871L7N248 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm6871L7N248 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm6871L7N248 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm6871L7N248 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm6871L7N248 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Gm6871L7N248 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.39■□□□□ 0.69
Gm6871L7N248 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gm6871L7N248 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm6871L7N248 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm6871L7N248 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm6871L7N248 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Gm6871L7N248 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Gm6871L7N248 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm6871L7N248 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Gm6871L7N248 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm6871L7N248 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.36■□□□□ 0.69
Gm6871L7N248 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm6871L7N248 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Gm6871L7N248 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm6871L7N248 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm6871L7N248 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm6871L7N248 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm6871L7N248 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm6871L7N248 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm6871L7N248 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm6871L7N248 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm6871L7N248 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm6871L7N248 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm6871L7N248 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm6871L7N248 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm6871L7N248 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.28■□□□□ 0.68
Gm6871L7N248 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.28■□□□□ 0.68
Gm6871L7N248 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm6871L7N248 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.27■□□□□ 0.68
Gm6871L7N248 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Gm6871L7N248 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Gm6871L7N248 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm6871L7N248 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Gm6871L7N248 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm6871L7N248 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm6871L7N248 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm6871L7N248 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gm6871L7N248 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm6871L7N248 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm6871L7N248 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Gm6871L7N248 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm6871L7N248 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gm6871L7N248 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm6871L7N248 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gm6871L7N248 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gm6871L7N248 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm6871L7N248 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm6871L7N248 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm6871L7N248 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm6871L7N248 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Gm6871L7N248 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm6871L7N248 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm6871L7N248 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm6871L7N248 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Gm6871L7N248 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm6871L7N248 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm6871L7N248 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm6871L7N248 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
Gm6871L7N248 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm6871L7N248 Gm24804-201ENSMUST00000174982 85 ntBASIC19.16■□□□□ 0.66
Gm6871L7N248 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Gm6871L7N248 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.16■□□□□ 0.66
Gm6871L7N248 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gm6871L7N248 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms