Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29.61■■■□□ 2.33
B020004C17RikJ3QP07 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
B020004C17RikJ3QP07 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
B020004C17RikJ3QP07 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
B020004C17RikJ3QP07 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC29.52■■■□□ 2.32
B020004C17RikJ3QP07 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
B020004C17RikJ3QP07 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
B020004C17RikJ3QP07 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC29.5■■■□□ 2.31
B020004C17RikJ3QP07 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
B020004C17RikJ3QP07 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC29.49■■■□□ 2.31
B020004C17RikJ3QP07 Gm5987-201ENSMUST00000196433 1151 ntBASIC29.49■■■□□ 2.31
B020004C17RikJ3QP07 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC29.49■■■□□ 2.31
B020004C17RikJ3QP07 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
B020004C17RikJ3QP07 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
B020004C17RikJ3QP07 Gm9939-201ENSMUST00000067161 1154 ntBASIC29.47■■■□□ 2.31
B020004C17RikJ3QP07 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
B020004C17RikJ3QP07 Gm43863-201ENSMUST00000203822 1192 ntBASIC29.43■■■□□ 2.3
B020004C17RikJ3QP07 Gm8503-201ENSMUST00000118131 455 ntBASIC29.42■■■□□ 2.3
B020004C17RikJ3QP07 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC29.41■■■□□ 2.3
B020004C17RikJ3QP07 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
B020004C17RikJ3QP07 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
B020004C17RikJ3QP07 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
B020004C17RikJ3QP07 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
B020004C17RikJ3QP07 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
B020004C17RikJ3QP07 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC29.38■■■□□ 2.29
B020004C17RikJ3QP07 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
B020004C17RikJ3QP07 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
B020004C17RikJ3QP07 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
B020004C17RikJ3QP07 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
B020004C17RikJ3QP07 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
B020004C17RikJ3QP07 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC29.33■■■□□ 2.29
B020004C17RikJ3QP07 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
B020004C17RikJ3QP07 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
B020004C17RikJ3QP07 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
B020004C17RikJ3QP07 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
B020004C17RikJ3QP07 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
B020004C17RikJ3QP07 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
B020004C17RikJ3QP07 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
B020004C17RikJ3QP07 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
B020004C17RikJ3QP07 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
B020004C17RikJ3QP07 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
B020004C17RikJ3QP07 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC29.25■■■□□ 2.27
B020004C17RikJ3QP07 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
B020004C17RikJ3QP07 Gm6821-201ENSMUST00000107540 542 ntBASIC29.24■■■□□ 2.27
B020004C17RikJ3QP07 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
B020004C17RikJ3QP07 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC29.23■■■□□ 2.27
B020004C17RikJ3QP07 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
B020004C17RikJ3QP07 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
B020004C17RikJ3QP07 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC29.21■■■□□ 2.27
B020004C17RikJ3QP07 AC157572.2-201ENSMUST00000226970 908 ntBASIC29.2■■■□□ 2.26
B020004C17RikJ3QP07 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC29.19■■■□□ 2.26
B020004C17RikJ3QP07 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
B020004C17RikJ3QP07 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
B020004C17RikJ3QP07 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC29.17■■■□□ 2.26
B020004C17RikJ3QP07 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC29.16■■■□□ 2.26
B020004C17RikJ3QP07 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
B020004C17RikJ3QP07 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
B020004C17RikJ3QP07 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
B020004C17RikJ3QP07 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC29.14■■■□□ 2.26
B020004C17RikJ3QP07 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
B020004C17RikJ3QP07 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC29.1■■■□□ 2.25
B020004C17RikJ3QP07 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
B020004C17RikJ3QP07 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
B020004C17RikJ3QP07 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
B020004C17RikJ3QP07 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
B020004C17RikJ3QP07 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
B020004C17RikJ3QP07 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC29.06■■■□□ 2.24
B020004C17RikJ3QP07 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
B020004C17RikJ3QP07 Gm42809-201ENSMUST00000198429 1138 ntBASIC29.02■■■□□ 2.24
B020004C17RikJ3QP07 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
B020004C17RikJ3QP07 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
B020004C17RikJ3QP07 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
B020004C17RikJ3QP07 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC29.01■■■□□ 2.23
B020004C17RikJ3QP07 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
B020004C17RikJ3QP07 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC29■■■□□ 2.23
B020004C17RikJ3QP07 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
B020004C17RikJ3QP07 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
B020004C17RikJ3QP07 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC28.99■■■□□ 2.23
B020004C17RikJ3QP07 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC28.99■■■□□ 2.23
B020004C17RikJ3QP07 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
B020004C17RikJ3QP07 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.98■■■□□ 2.23
B020004C17RikJ3QP07 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC28.97■■■□□ 2.23
B020004C17RikJ3QP07 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.97■■■□□ 2.23
B020004C17RikJ3QP07 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC28.97■■■□□ 2.23
B020004C17RikJ3QP07 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
B020004C17RikJ3QP07 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
B020004C17RikJ3QP07 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
B020004C17RikJ3QP07 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.22
B020004C17RikJ3QP07 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC28.93■■■□□ 2.22
B020004C17RikJ3QP07 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
B020004C17RikJ3QP07 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC28.92■■■□□ 2.22
B020004C17RikJ3QP07 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
B020004C17RikJ3QP07 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28.91■■■□□ 2.22
B020004C17RikJ3QP07 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.9■■■□□ 2.22
B020004C17RikJ3QP07 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
B020004C17RikJ3QP07 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.9■■■□□ 2.22
B020004C17RikJ3QP07 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
B020004C17RikJ3QP07 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.89■■■□□ 2.21
B020004C17RikJ3QP07 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
B020004C17RikJ3QP07 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms