Protein–RNA interactions for Protein: E9Q4T4

Ccdc71l, Coiled-coil domain-containing 71-like, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71lE9Q4T4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc71lE9Q4T4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc71lE9Q4T4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc71lE9Q4T4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc71lE9Q4T4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Ccdc71lE9Q4T4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc71lE9Q4T4 Gm25262-201ENSMUST00000174934 133 ntBASIC19.63■□□□□ 0.73
Ccdc71lE9Q4T4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc71lE9Q4T4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc71lE9Q4T4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc71lE9Q4T4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc71lE9Q4T4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc71lE9Q4T4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc71lE9Q4T4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc71lE9Q4T4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc71lE9Q4T4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Ccdc71lE9Q4T4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc71lE9Q4T4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc71lE9Q4T4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc71lE9Q4T4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc71lE9Q4T4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc71lE9Q4T4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc71lE9Q4T4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ccdc71lE9Q4T4 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.55■□□□□ 0.72
Ccdc71lE9Q4T4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc71lE9Q4T4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
Ccdc71lE9Q4T4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc71lE9Q4T4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc71lE9Q4T4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc71lE9Q4T4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.55■□□□□ 0.72
Ccdc71lE9Q4T4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc71lE9Q4T4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc71lE9Q4T4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc71lE9Q4T4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc71lE9Q4T4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc71lE9Q4T4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ccdc71lE9Q4T4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc71lE9Q4T4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc71lE9Q4T4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc71lE9Q4T4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Ccdc71lE9Q4T4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Ccdc71lE9Q4T4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc71lE9Q4T4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc71lE9Q4T4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc71lE9Q4T4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc71lE9Q4T4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc71lE9Q4T4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc71lE9Q4T4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc71lE9Q4T4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc71lE9Q4T4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc71lE9Q4T4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc71lE9Q4T4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ccdc71lE9Q4T4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.45■□□□□ 0.7
Ccdc71lE9Q4T4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc71lE9Q4T4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc71lE9Q4T4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc71lE9Q4T4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.44■□□□□ 0.7
Ccdc71lE9Q4T4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc71lE9Q4T4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc71lE9Q4T4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc71lE9Q4T4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc71lE9Q4T4 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.41■□□□□ 0.7
Ccdc71lE9Q4T4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
Ccdc71lE9Q4T4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc71lE9Q4T4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc71lE9Q4T4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc71lE9Q4T4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccdc71lE9Q4T4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc71lE9Q4T4 Gm27322-201ENSMUST00000184007 104 ntBASIC19.36■□□□□ 0.69
Ccdc71lE9Q4T4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.36■□□□□ 0.69
Ccdc71lE9Q4T4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc71lE9Q4T4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc71lE9Q4T4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc71lE9Q4T4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc71lE9Q4T4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc71lE9Q4T4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Ccdc71lE9Q4T4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc71lE9Q4T4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc71lE9Q4T4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc71lE9Q4T4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc71lE9Q4T4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc71lE9Q4T4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc71lE9Q4T4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ccdc71lE9Q4T4 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.32■□□□□ 0.68
Ccdc71lE9Q4T4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc71lE9Q4T4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc71lE9Q4T4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc71lE9Q4T4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ccdc71lE9Q4T4 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc71lE9Q4T4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc71lE9Q4T4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc71lE9Q4T4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
Ccdc71lE9Q4T4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc71lE9Q4T4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc71lE9Q4T4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc71lE9Q4T4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.29■□□□□ 0.68
Ccdc71lE9Q4T4 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.29■□□□□ 0.68
Ccdc71lE9Q4T4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc71lE9Q4T4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc71lE9Q4T4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms