Protein–RNA interactions for Protein: D3YUM8

Gm4950, Proteasome subunit beta type, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4950D3YUM8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.45■■□□□ 1.02
Gm4950D3YUM8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Gm4950D3YUM8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm4950D3YUM8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Gm4950D3YUM8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
Gm4950D3YUM8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm4950D3YUM8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Gm4950D3YUM8 Zxda-201ENSMUST00000117281 2621 ntBASIC21.42■■□□□ 1.02
Gm4950D3YUM8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Gm4950D3YUM8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm4950D3YUM8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Gm4950D3YUM8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm4950D3YUM8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm4950D3YUM8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Gm4950D3YUM8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Gm4950D3YUM8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm4950D3YUM8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.02
Gm4950D3YUM8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm4950D3YUM8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.38■■□□□ 1.01
Gm4950D3YUM8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.38■■□□□ 1.01
Gm4950D3YUM8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Gm4950D3YUM8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Gm4950D3YUM8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Gm4950D3YUM8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm4950D3YUM8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm4950D3YUM8 Gm24804-201ENSMUST00000174982 85 ntBASIC21.34■■□□□ 1.01
Gm4950D3YUM8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gm4950D3YUM8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Gm4950D3YUM8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Gm4950D3YUM8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm4950D3YUM8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm4950D3YUM8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Gm4950D3YUM8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm4950D3YUM8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm4950D3YUM8 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.29■■□□□ 1
Gm4950D3YUM8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm4950D3YUM8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm4950D3YUM8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.26■□□□□ 0.99
Gm4950D3YUM8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm4950D3YUM8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm4950D3YUM8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Gm4950D3YUM8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm4950D3YUM8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Gm4950D3YUM8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gm4950D3YUM8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm4950D3YUM8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm4950D3YUM8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm4950D3YUM8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm4950D3YUM8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.23■□□□□ 0.99
Gm4950D3YUM8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm4950D3YUM8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm4950D3YUM8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Gm4950D3YUM8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Gm4950D3YUM8 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.21■□□□□ 0.99
Gm4950D3YUM8 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.21■□□□□ 0.99
Gm4950D3YUM8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm4950D3YUM8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gm4950D3YUM8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm4950D3YUM8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm4950D3YUM8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Gm4950D3YUM8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Gm4950D3YUM8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Gm4950D3YUM8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Gm4950D3YUM8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.16■□□□□ 0.98
Gm4950D3YUM8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Gm4950D3YUM8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Gm4950D3YUM8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Gm4950D3YUM8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Gm4950D3YUM8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm4950D3YUM8 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.14■□□□□ 0.97
Gm4950D3YUM8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm4950D3YUM8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm4950D3YUM8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gm4950D3YUM8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm4950D3YUM8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm4950D3YUM8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Gm4950D3YUM8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.11■□□□□ 0.97
Gm4950D3YUM8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Gm4950D3YUM8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Gm4950D3YUM8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gm4950D3YUM8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm4950D3YUM8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm4950D3YUM8 Gm16148-201ENSMUST00000119653 893 ntBASIC21.1■□□□□ 0.97
Gm4950D3YUM8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm4950D3YUM8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm4950D3YUM8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Gm4950D3YUM8 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.08■□□□□ 0.97
Gm4950D3YUM8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm4950D3YUM8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Gm4950D3YUM8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm4950D3YUM8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gm4950D3YUM8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm4950D3YUM8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm4950D3YUM8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm4950D3YUM8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm4950D3YUM8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gm4950D3YUM8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm4950D3YUM8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm4950D3YUM8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm4950D3YUM8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms