Protein–RNA interactions for Protein: A0A1B0GSD2

Slc6a21, Transporter, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a21A0A1B0GSD2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Slc6a21A0A1B0GSD2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Slc6a21A0A1B0GSD2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Slc6a21A0A1B0GSD2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
Slc6a21A0A1B0GSD2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Slc6a21A0A1B0GSD2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC28.43■■■□□ 2.14
Slc6a21A0A1B0GSD2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Slc6a21A0A1B0GSD2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Slc6a21A0A1B0GSD2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.4■■■□□ 2.14
Slc6a21A0A1B0GSD2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.38■■■□□ 2.13
Slc6a21A0A1B0GSD2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Slc6a21A0A1B0GSD2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC28.37■■■□□ 2.13
Slc6a21A0A1B0GSD2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Slc6a21A0A1B0GSD2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC28.36■■■□□ 2.13
Slc6a21A0A1B0GSD2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Slc6a21A0A1B0GSD2 Gm5987-201ENSMUST00000196433 1151 ntBASIC28.35■■■□□ 2.13
Slc6a21A0A1B0GSD2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Slc6a21A0A1B0GSD2 Gm9939-201ENSMUST00000067161 1154 ntBASIC28.33■■■□□ 2.13
Slc6a21A0A1B0GSD2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Slc6a21A0A1B0GSD2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
Slc6a21A0A1B0GSD2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Slc6a21A0A1B0GSD2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.32■■■□□ 2.12
Slc6a21A0A1B0GSD2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Slc6a21A0A1B0GSD2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Slc6a21A0A1B0GSD2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Slc6a21A0A1B0GSD2 Gm43863-201ENSMUST00000203822 1192 ntBASIC28.27■■■□□ 2.12
Slc6a21A0A1B0GSD2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Slc6a21A0A1B0GSD2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28.27■■■□□ 2.12
Slc6a21A0A1B0GSD2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Slc6a21A0A1B0GSD2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
Slc6a21A0A1B0GSD2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Slc6a21A0A1B0GSD2 Gm8503-201ENSMUST00000118131 455 ntBASIC28.21■■■□□ 2.11
Slc6a21A0A1B0GSD2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Slc6a21A0A1B0GSD2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
Slc6a21A0A1B0GSD2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
Slc6a21A0A1B0GSD2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Slc6a21A0A1B0GSD2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
Slc6a21A0A1B0GSD2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Slc6a21A0A1B0GSD2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Slc6a21A0A1B0GSD2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
Slc6a21A0A1B0GSD2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Slc6a21A0A1B0GSD2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Slc6a21A0A1B0GSD2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC28.14■■■□□ 2.1
Slc6a21A0A1B0GSD2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC28.13■■■□□ 2.09
Slc6a21A0A1B0GSD2 Gm6821-201ENSMUST00000107540 542 ntBASIC28.12■■■□□ 2.09
Slc6a21A0A1B0GSD2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Slc6a21A0A1B0GSD2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Slc6a21A0A1B0GSD2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Slc6a21A0A1B0GSD2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Slc6a21A0A1B0GSD2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Slc6a21A0A1B0GSD2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Slc6a21A0A1B0GSD2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC28.09■■■□□ 2.09
Slc6a21A0A1B0GSD2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Slc6a21A0A1B0GSD2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
Slc6a21A0A1B0GSD2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Slc6a21A0A1B0GSD2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Slc6a21A0A1B0GSD2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Slc6a21A0A1B0GSD2 AC157572.2-201ENSMUST00000226970 908 ntBASIC28.04■■■□□ 2.08
Slc6a21A0A1B0GSD2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC28.03■■■□□ 2.08
Slc6a21A0A1B0GSD2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
Slc6a21A0A1B0GSD2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Slc6a21A0A1B0GSD2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
Slc6a21A0A1B0GSD2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Slc6a21A0A1B0GSD2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Slc6a21A0A1B0GSD2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC27.98■■■□□ 2.07
Slc6a21A0A1B0GSD2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Slc6a21A0A1B0GSD2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Slc6a21A0A1B0GSD2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
Slc6a21A0A1B0GSD2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Slc6a21A0A1B0GSD2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Slc6a21A0A1B0GSD2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.96■■■□□ 2.07
Slc6a21A0A1B0GSD2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Slc6a21A0A1B0GSD2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Slc6a21A0A1B0GSD2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC27.91■■■□□ 2.06
Slc6a21A0A1B0GSD2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC27.91■■■□□ 2.06
Slc6a21A0A1B0GSD2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.91■■■□□ 2.06
Slc6a21A0A1B0GSD2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Slc6a21A0A1B0GSD2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Slc6a21A0A1B0GSD2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Slc6a21A0A1B0GSD2 Gm42809-201ENSMUST00000198429 1138 ntBASIC27.87■■■□□ 2.05
Slc6a21A0A1B0GSD2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Slc6a21A0A1B0GSD2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Slc6a21A0A1B0GSD2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC27.86■■■□□ 2.05
Slc6a21A0A1B0GSD2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC27.86■■■□□ 2.05
Slc6a21A0A1B0GSD2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
Slc6a21A0A1B0GSD2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC27.85■■■□□ 2.05
Slc6a21A0A1B0GSD2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Slc6a21A0A1B0GSD2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Slc6a21A0A1B0GSD2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Slc6a21A0A1B0GSD2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
Slc6a21A0A1B0GSD2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Slc6a21A0A1B0GSD2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
Slc6a21A0A1B0GSD2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.04
Slc6a21A0A1B0GSD2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Slc6a21A0A1B0GSD2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Slc6a21A0A1B0GSD2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC27.8■■■□□ 2.04
Slc6a21A0A1B0GSD2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Slc6a21A0A1B0GSD2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC27.78■■■□□ 2.04
Slc6a21A0A1B0GSD2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
Slc6a21A0A1B0GSD2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC27.78■■■□□ 2.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms