Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gm3880A0A1B0GSB3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Gm3880A0A1B0GSB3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gm3880A0A1B0GSB3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
Gm3880A0A1B0GSB3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Gm3880A0A1B0GSB3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3880A0A1B0GSB3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3880A0A1B0GSB3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3880A0A1B0GSB3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gm3880A0A1B0GSB3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Gm3880A0A1B0GSB3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3880A0A1B0GSB3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm3880A0A1B0GSB3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm3880A0A1B0GSB3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm3880A0A1B0GSB3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm3880A0A1B0GSB3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC12.66□□□□□ -0.38
Gm3880A0A1B0GSB3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm3880A0A1B0GSB3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm3880A0A1B0GSB3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm3880A0A1B0GSB3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm3880A0A1B0GSB3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm3880A0A1B0GSB3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Gm3880A0A1B0GSB3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Gm3880A0A1B0GSB3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm3880A0A1B0GSB3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm3880A0A1B0GSB3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm3880A0A1B0GSB3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm3880A0A1B0GSB3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm3880A0A1B0GSB3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm3880A0A1B0GSB3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm3880A0A1B0GSB3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm3880A0A1B0GSB3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gm3880A0A1B0GSB3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm3880A0A1B0GSB3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm3880A0A1B0GSB3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm3880A0A1B0GSB3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm3880A0A1B0GSB3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm3880A0A1B0GSB3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3880A0A1B0GSB3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3880A0A1B0GSB3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3880A0A1B0GSB3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Gm3880A0A1B0GSB3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Gm3880A0A1B0GSB3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC12.58□□□□□ -0.4
Gm3880A0A1B0GSB3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3880A0A1B0GSB3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3880A0A1B0GSB3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC12.58□□□□□ -0.4
Gm3880A0A1B0GSB3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3880A0A1B0GSB3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3880A0A1B0GSB3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3880A0A1B0GSB3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3880A0A1B0GSB3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3880A0A1B0GSB3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3880A0A1B0GSB3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Gm3880A0A1B0GSB3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3880A0A1B0GSB3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3880A0A1B0GSB3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3880A0A1B0GSB3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3880A0A1B0GSB3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC12.53□□□□□ -0.4
Gm3880A0A1B0GSB3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Gm3880A0A1B0GSB3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3880A0A1B0GSB3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3880A0A1B0GSB3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Gm3880A0A1B0GSB3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Gm3880A0A1B0GSB3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm3880A0A1B0GSB3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm3880A0A1B0GSB3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3880A0A1B0GSB3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3880A0A1B0GSB3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3880A0A1B0GSB3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Gm3880A0A1B0GSB3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Gm3880A0A1B0GSB3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3880A0A1B0GSB3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3880A0A1B0GSB3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3880A0A1B0GSB3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Gm3880A0A1B0GSB3 Gm6658-202ENSMUST00000209493 1885 ntBASIC12.49□□□□□ -0.41
Gm3880A0A1B0GSB3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3880A0A1B0GSB3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3880A0A1B0GSB3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gm3880A0A1B0GSB3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Gm3880A0A1B0GSB3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3880A0A1B0GSB3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gm3880A0A1B0GSB3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm3880A0A1B0GSB3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm3880A0A1B0GSB3 Amer2-203ENSMUST00000225247 2662 ntBASIC12.45□□□□□ -0.42
Gm3880A0A1B0GSB3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm3880A0A1B0GSB3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm3880A0A1B0GSB3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm3880A0A1B0GSB3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3880A0A1B0GSB3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3880A0A1B0GSB3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3880A0A1B0GSB3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3880A0A1B0GSB3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3880A0A1B0GSB3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3880A0A1B0GSB3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Gm3880A0A1B0GSB3 Gm20634-201ENSMUST00000090779 2956 ntBASIC12.42□□□□□ -0.42
Gm3880A0A1B0GSB3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Gm3880A0A1B0GSB3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm3880A0A1B0GSB3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC12.42□□□□□ -0.42
Gm3880A0A1B0GSB3 Gm43445-201ENSMUST00000198564 2091 ntBASIC12.41□□□□□ -0.42
Gm3880A0A1B0GSB3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms