Protein–RNA interactions for Protein: A0A140T8P4

Igkv3-9, Immunoglobulin kappa variable 3-9 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-9A0A140T8P4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC17.47■□□□□ 0.39
Igkv3-9A0A140T8P4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igkv3-9A0A140T8P4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igkv3-9A0A140T8P4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC17.45■□□□□ 0.38
Igkv3-9A0A140T8P4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv3-9A0A140T8P4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Igkv3-9A0A140T8P4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.45■□□□□ 0.38
Igkv3-9A0A140T8P4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv3-9A0A140T8P4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv3-9A0A140T8P4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv3-9A0A140T8P4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv3-9A0A140T8P4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv3-9A0A140T8P4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Igkv3-9A0A140T8P4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv3-9A0A140T8P4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv3-9A0A140T8P4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv3-9A0A140T8P4 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv3-9A0A140T8P4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC17.4■□□□□ 0.38
Igkv3-9A0A140T8P4 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC17.39■□□□□ 0.38
Igkv3-9A0A140T8P4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Igkv3-9A0A140T8P4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv3-9A0A140T8P4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv3-9A0A140T8P4 Peli2-204ENSMUST00000226513 1320 ntBASIC17.39■□□□□ 0.37
Igkv3-9A0A140T8P4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Igkv3-9A0A140T8P4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Igkv3-9A0A140T8P4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Igkv3-9A0A140T8P4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv3-9A0A140T8P4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17.37■□□□□ 0.37
Igkv3-9A0A140T8P4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv3-9A0A140T8P4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.37■□□□□ 0.37
Igkv3-9A0A140T8P4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Igkv3-9A0A140T8P4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv3-9A0A140T8P4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv3-9A0A140T8P4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.36■□□□□ 0.37
Igkv3-9A0A140T8P4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Igkv3-9A0A140T8P4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Igkv3-9A0A140T8P4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv3-9A0A140T8P4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv3-9A0A140T8P4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
Igkv3-9A0A140T8P4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv3-9A0A140T8P4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv3-9A0A140T8P4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv3-9A0A140T8P4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Igkv3-9A0A140T8P4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
Igkv3-9A0A140T8P4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Igkv3-9A0A140T8P4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Igkv3-9A0A140T8P4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Igkv3-9A0A140T8P4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Igkv3-9A0A140T8P4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Igkv3-9A0A140T8P4 Gm24804-201ENSMUST00000174982 85 ntBASIC17.29■□□□□ 0.36
Igkv3-9A0A140T8P4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Igkv3-9A0A140T8P4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igkv3-9A0A140T8P4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Igkv3-9A0A140T8P4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igkv3-9A0A140T8P4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igkv3-9A0A140T8P4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Igkv3-9A0A140T8P4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Igkv3-9A0A140T8P4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Igkv3-9A0A140T8P4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Igkv3-9A0A140T8P4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Igkv3-9A0A140T8P4 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Igkv3-9A0A140T8P4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv3-9A0A140T8P4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igkv3-9A0A140T8P4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Igkv3-9A0A140T8P4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Igkv3-9A0A140T8P4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Igkv3-9A0A140T8P4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Igkv3-9A0A140T8P4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv3-9A0A140T8P4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Igkv3-9A0A140T8P4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Igkv3-9A0A140T8P4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Igkv3-9A0A140T8P4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv3-9A0A140T8P4 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.22■□□□□ 0.35
Igkv3-9A0A140T8P4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv3-9A0A140T8P4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv3-9A0A140T8P4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv3-9A0A140T8P4 Zxda-201ENSMUST00000117281 2621 ntBASIC17.21■□□□□ 0.35
Igkv3-9A0A140T8P4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Igkv3-9A0A140T8P4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Igkv3-9A0A140T8P4 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.2■□□□□ 0.34
Igkv3-9A0A140T8P4 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.2■□□□□ 0.34
Igkv3-9A0A140T8P4 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv3-9A0A140T8P4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv3-9A0A140T8P4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Igkv3-9A0A140T8P4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Igkv3-9A0A140T8P4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Igkv3-9A0A140T8P4 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv3-9A0A140T8P4 Gm16148-201ENSMUST00000119653 893 ntBASIC17.17■□□□□ 0.34
Igkv3-9A0A140T8P4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.17■□□□□ 0.34
Igkv3-9A0A140T8P4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv3-9A0A140T8P4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv3-9A0A140T8P4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv3-9A0A140T8P4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv3-9A0A140T8P4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Igkv3-9A0A140T8P4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv3-9A0A140T8P4 Gm30346-201ENSMUST00000218641 1699 ntBASIC17.15■□□□□ 0.34
Igkv3-9A0A140T8P4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv3-9A0A140T8P4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv3-9A0A140T8P4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv3-9A0A140T8P4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms