Protein–RNA interactions for Protein: A0A0B4J1J3

Igkv8-18, Immunoglobulin kappa variable 8-18 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-18A0A0B4J1J3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv8-18A0A0B4J1J3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv8-18A0A0B4J1J3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Igkv8-18A0A0B4J1J3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv8-18A0A0B4J1J3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv8-18A0A0B4J1J3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv8-18A0A0B4J1J3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv8-18A0A0B4J1J3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv8-18A0A0B4J1J3 Mipep-204ENSMUST00000225043 1548 ntBASIC16.66■□□□□ 0.26
Igkv8-18A0A0B4J1J3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv8-18A0A0B4J1J3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Igkv8-18A0A0B4J1J3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Igkv8-18A0A0B4J1J3 Rab21-202ENSMUST00000218831 843 ntBASIC16.65■□□□□ 0.26
Igkv8-18A0A0B4J1J3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Igkv8-18A0A0B4J1J3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv8-18A0A0B4J1J3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv8-18A0A0B4J1J3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv8-18A0A0B4J1J3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv8-18A0A0B4J1J3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv8-18A0A0B4J1J3 Amer2-203ENSMUST00000225247 2662 ntBASIC16.6■□□□□ 0.25
Igkv8-18A0A0B4J1J3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv8-18A0A0B4J1J3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Igkv8-18A0A0B4J1J3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv8-18A0A0B4J1J3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv8-18A0A0B4J1J3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv8-18A0A0B4J1J3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv8-18A0A0B4J1J3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv8-18A0A0B4J1J3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC16.56■□□□□ 0.24
Igkv8-18A0A0B4J1J3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Igkv8-18A0A0B4J1J3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv8-18A0A0B4J1J3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv8-18A0A0B4J1J3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Igkv8-18A0A0B4J1J3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Igkv8-18A0A0B4J1J3 AL845457.1-201ENSMUST00000197244 68 ntBASIC16.53■□□□□ 0.24
Igkv8-18A0A0B4J1J3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv8-18A0A0B4J1J3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
Igkv8-18A0A0B4J1J3 Fezf2-202ENSMUST00000224023 1917 ntBASIC16.53■□□□□ 0.24
Igkv8-18A0A0B4J1J3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Igkv8-18A0A0B4J1J3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Igkv8-18A0A0B4J1J3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Igkv8-18A0A0B4J1J3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv8-18A0A0B4J1J3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv8-18A0A0B4J1J3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv8-18A0A0B4J1J3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC16.5■□□□□ 0.23
Igkv8-18A0A0B4J1J3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Igkv8-18A0A0B4J1J3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv8-18A0A0B4J1J3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv8-18A0A0B4J1J3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv8-18A0A0B4J1J3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Igkv8-18A0A0B4J1J3 Gm6345-201ENSMUST00000180378 1691 ntBASIC16.48■□□□□ 0.23
Igkv8-18A0A0B4J1J3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv8-18A0A0B4J1J3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Igkv8-18A0A0B4J1J3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC16.47■□□□□ 0.23
Igkv8-18A0A0B4J1J3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv8-18A0A0B4J1J3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Igkv8-18A0A0B4J1J3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC16.46■□□□□ 0.23
Igkv8-18A0A0B4J1J3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv8-18A0A0B4J1J3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv8-18A0A0B4J1J3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv8-18A0A0B4J1J3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv8-18A0A0B4J1J3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv8-18A0A0B4J1J3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv8-18A0A0B4J1J3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv8-18A0A0B4J1J3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv8-18A0A0B4J1J3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv8-18A0A0B4J1J3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv8-18A0A0B4J1J3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv8-18A0A0B4J1J3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC16.41■□□□□ 0.22
Igkv8-18A0A0B4J1J3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv8-18A0A0B4J1J3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv8-18A0A0B4J1J3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv8-18A0A0B4J1J3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv8-18A0A0B4J1J3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv8-18A0A0B4J1J3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
Igkv8-18A0A0B4J1J3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv8-18A0A0B4J1J3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv8-18A0A0B4J1J3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv8-18A0A0B4J1J3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv8-18A0A0B4J1J3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv8-18A0A0B4J1J3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv8-18A0A0B4J1J3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv8-18A0A0B4J1J3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC16.37■□□□□ 0.21
Igkv8-18A0A0B4J1J3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igkv8-18A0A0B4J1J3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igkv8-18A0A0B4J1J3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igkv8-18A0A0B4J1J3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv8-18A0A0B4J1J3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv8-18A0A0B4J1J3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Igkv8-18A0A0B4J1J3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Igkv8-18A0A0B4J1J3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Igkv8-18A0A0B4J1J3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Igkv8-18A0A0B4J1J3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC16.33■□□□□ 0.2
Igkv8-18A0A0B4J1J3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv8-18A0A0B4J1J3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv8-18A0A0B4J1J3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv8-18A0A0B4J1J3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Igkv8-18A0A0B4J1J3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Igkv8-18A0A0B4J1J3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Igkv8-18A0A0B4J1J3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Igkv8-18A0A0B4J1J3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms