Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ighv1-47A0A0A6YY41 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ighv1-47A0A0A6YY41 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ighv1-47A0A0A6YY41 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ighv1-47A0A0A6YY41 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.93
Ighv1-47A0A0A6YY41 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ighv1-47A0A0A6YY41 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ighv1-47A0A0A6YY41 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ighv1-47A0A0A6YY41 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ighv1-47A0A0A6YY41 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ighv1-47A0A0A6YY41 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.81■□□□□ 0.92
Ighv1-47A0A0A6YY41 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.8■□□□□ 0.92
Ighv1-47A0A0A6YY41 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ighv1-47A0A0A6YY41 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ighv1-47A0A0A6YY41 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ighv1-47A0A0A6YY41 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ighv1-47A0A0A6YY41 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ighv1-47A0A0A6YY41 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ighv1-47A0A0A6YY41 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ighv1-47A0A0A6YY41 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ighv1-47A0A0A6YY41 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.75■□□□□ 0.91
Ighv1-47A0A0A6YY41 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ighv1-47A0A0A6YY41 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ighv1-47A0A0A6YY41 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ighv1-47A0A0A6YY41 Peli2-204ENSMUST00000226513 1320 ntBASIC20.71■□□□□ 0.91
Ighv1-47A0A0A6YY41 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ighv1-47A0A0A6YY41 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ighv1-47A0A0A6YY41 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ighv1-47A0A0A6YY41 Gm24804-201ENSMUST00000174982 85 ntBASIC20.67■□□□□ 0.9
Ighv1-47A0A0A6YY41 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ighv1-47A0A0A6YY41 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Ighv1-47A0A0A6YY41 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.66■□□□□ 0.9
Ighv1-47A0A0A6YY41 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ighv1-47A0A0A6YY41 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Ighv1-47A0A0A6YY41 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.64■□□□□ 0.89
Ighv1-47A0A0A6YY41 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ighv1-47A0A0A6YY41 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Ighv1-47A0A0A6YY41 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ighv1-47A0A0A6YY41 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ighv1-47A0A0A6YY41 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ighv1-47A0A0A6YY41 Amer2-203ENSMUST00000225247 2662 ntBASIC20.61■□□□□ 0.89
Ighv1-47A0A0A6YY41 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ighv1-47A0A0A6YY41 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ighv1-47A0A0A6YY41 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ighv1-47A0A0A6YY41 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ighv1-47A0A0A6YY41 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.59■□□□□ 0.89
Ighv1-47A0A0A6YY41 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Ighv1-47A0A0A6YY41 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Ighv1-47A0A0A6YY41 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ighv1-47A0A0A6YY41 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ighv1-47A0A0A6YY41 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Ighv1-47A0A0A6YY41 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ighv1-47A0A0A6YY41 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ighv1-47A0A0A6YY41 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ighv1-47A0A0A6YY41 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ighv1-47A0A0A6YY41 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.55■□□□□ 0.88
Ighv1-47A0A0A6YY41 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
Ighv1-47A0A0A6YY41 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv1-47A0A0A6YY41 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv1-47A0A0A6YY41 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.54■□□□□ 0.88
Ighv1-47A0A0A6YY41 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ighv1-47A0A0A6YY41 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ighv1-47A0A0A6YY41 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.52■□□□□ 0.88
Ighv1-47A0A0A6YY41 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ighv1-47A0A0A6YY41 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ighv1-47A0A0A6YY41 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.51■□□□□ 0.87
Ighv1-47A0A0A6YY41 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ighv1-47A0A0A6YY41 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ighv1-47A0A0A6YY41 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Ighv1-47A0A0A6YY41 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ighv1-47A0A0A6YY41 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ighv1-47A0A0A6YY41 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ighv1-47A0A0A6YY41 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ighv1-47A0A0A6YY41 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ighv1-47A0A0A6YY41 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Ighv1-47A0A0A6YY41 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ighv1-47A0A0A6YY41 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.47■□□□□ 0.87
Ighv1-47A0A0A6YY41 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ighv1-47A0A0A6YY41 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Ighv1-47A0A0A6YY41 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ighv1-47A0A0A6YY41 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ighv1-47A0A0A6YY41 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.45■□□□□ 0.86
Ighv1-47A0A0A6YY41 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ighv1-47A0A0A6YY41 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ighv1-47A0A0A6YY41 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ighv1-47A0A0A6YY41 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ighv1-47A0A0A6YY41 Gm16148-201ENSMUST00000119653 893 ntBASIC20.42■□□□□ 0.86
Ighv1-47A0A0A6YY41 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ighv1-47A0A0A6YY41 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ighv1-47A0A0A6YY41 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ighv1-47A0A0A6YY41 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ighv1-47A0A0A6YY41 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ighv1-47A0A0A6YY41 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.4■□□□□ 0.86
Ighv1-47A0A0A6YY41 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.4■□□□□ 0.86
Ighv1-47A0A0A6YY41 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ighv1-47A0A0A6YY41 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ighv1-47A0A0A6YY41 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ighv1-47A0A0A6YY41 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ighv1-47A0A0A6YY41 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ighv1-47A0A0A6YY41 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms