Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.76■□□□□ 0.91
Gm28778A0A087WSK7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gm28778A0A087WSK7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gm28778A0A087WSK7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm28778A0A087WSK7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Gm28778A0A087WSK7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm28778A0A087WSK7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm28778A0A087WSK7 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm28778A0A087WSK7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm28778A0A087WSK7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Gm28778A0A087WSK7 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Gm28778A0A087WSK7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28778A0A087WSK7 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Gm28778A0A087WSK7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28778A0A087WSK7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28778A0A087WSK7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28778A0A087WSK7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28778A0A087WSK7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28778A0A087WSK7 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.67■□□□□ 0.9
Gm28778A0A087WSK7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28778A0A087WSK7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28778A0A087WSK7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28778A0A087WSK7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.64■□□□□ 0.89
Gm28778A0A087WSK7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Gm28778A0A087WSK7 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm28778A0A087WSK7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.62■□□□□ 0.89
Gm28778A0A087WSK7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
Gm28778A0A087WSK7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Gm28778A0A087WSK7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm28778A0A087WSK7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Gm28778A0A087WSK7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm28778A0A087WSK7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Gm28778A0A087WSK7 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gm28778A0A087WSK7 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Gm28778A0A087WSK7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.61■□□□□ 0.89
Gm28778A0A087WSK7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm28778A0A087WSK7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm28778A0A087WSK7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gm28778A0A087WSK7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gm28778A0A087WSK7 Zfp131-205ENSMUST00000223812 663 ntBASIC20.6■□□□□ 0.89
Gm28778A0A087WSK7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm28778A0A087WSK7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Gm28778A0A087WSK7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Gm28778A0A087WSK7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm28778A0A087WSK7 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm28778A0A087WSK7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28778A0A087WSK7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28778A0A087WSK7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28778A0A087WSK7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.53■□□□□ 0.88
Gm28778A0A087WSK7 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.52■□□□□ 0.88
Gm28778A0A087WSK7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm28778A0A087WSK7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gm28778A0A087WSK7 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gm28778A0A087WSK7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28778A0A087WSK7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28778A0A087WSK7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28778A0A087WSK7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28778A0A087WSK7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Gm28778A0A087WSK7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28778A0A087WSK7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Gm28778A0A087WSK7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28778A0A087WSK7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.46■□□□□ 0.87
Gm28778A0A087WSK7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm28778A0A087WSK7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gm28778A0A087WSK7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm28778A0A087WSK7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.44■□□□□ 0.86
Gm28778A0A087WSK7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm28778A0A087WSK7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm28778A0A087WSK7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm28778A0A087WSK7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gm28778A0A087WSK7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm28778A0A087WSK7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gm28778A0A087WSK7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm28778A0A087WSK7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.41■□□□□ 0.86
Gm28778A0A087WSK7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Gm28778A0A087WSK7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.4■□□□□ 0.86
Gm28778A0A087WSK7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Gm28778A0A087WSK7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm28778A0A087WSK7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gm28778A0A087WSK7 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.39■□□□□ 0.85
Gm28778A0A087WSK7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gm28778A0A087WSK7 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm28778A0A087WSK7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gm28778A0A087WSK7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm28778A0A087WSK7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28778A0A087WSK7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28778A0A087WSK7 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28778A0A087WSK7 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Gm28778A0A087WSK7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Gm28778A0A087WSK7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.33■□□□□ 0.85
Gm28778A0A087WSK7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.33■□□□□ 0.84
Gm28778A0A087WSK7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Gm28778A0A087WSK7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28778A0A087WSK7 Zxda-201ENSMUST00000117281 2621 ntBASIC20.32■□□□□ 0.84
Gm28778A0A087WSK7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28778A0A087WSK7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28778A0A087WSK7 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28778A0A087WSK7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28778A0A087WSK7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.3■□□□□ 0.84
Gm28778A0A087WSK7 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms