Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.76■□□□□ 0.91
Gm28778A0A087WSK7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gm28778A0A087WSK7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gm28778A0A087WSK7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm28778A0A087WSK7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Gm28778A0A087WSK7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm28778A0A087WSK7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm28778A0A087WSK7 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm28778A0A087WSK7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm28778A0A087WSK7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Gm28778A0A087WSK7 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Gm28778A0A087WSK7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28778A0A087WSK7 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Gm28778A0A087WSK7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28778A0A087WSK7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28778A0A087WSK7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28778A0A087WSK7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28778A0A087WSK7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28778A0A087WSK7 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.67■□□□□ 0.9
Gm28778A0A087WSK7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28778A0A087WSK7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28778A0A087WSK7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28778A0A087WSK7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.64■□□□□ 0.89
Gm28778A0A087WSK7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Gm28778A0A087WSK7 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm28778A0A087WSK7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.62■□□□□ 0.89
Gm28778A0A087WSK7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
Gm28778A0A087WSK7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Gm28778A0A087WSK7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm28778A0A087WSK7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Gm28778A0A087WSK7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm28778A0A087WSK7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Gm28778A0A087WSK7 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gm28778A0A087WSK7 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Gm28778A0A087WSK7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.61■□□□□ 0.89
Gm28778A0A087WSK7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm28778A0A087WSK7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm28778A0A087WSK7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gm28778A0A087WSK7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gm28778A0A087WSK7 Zfp131-205ENSMUST00000223812 663 ntBASIC20.6■□□□□ 0.89
Gm28778A0A087WSK7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm28778A0A087WSK7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Gm28778A0A087WSK7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Gm28778A0A087WSK7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm28778A0A087WSK7 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm28778A0A087WSK7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28778A0A087WSK7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28778A0A087WSK7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28778A0A087WSK7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.53■□□□□ 0.88
Gm28778A0A087WSK7 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.52■□□□□ 0.88
Gm28778A0A087WSK7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm28778A0A087WSK7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gm28778A0A087WSK7 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gm28778A0A087WSK7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28778A0A087WSK7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28778A0A087WSK7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28778A0A087WSK7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28778A0A087WSK7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Gm28778A0A087WSK7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28778A0A087WSK7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Gm28778A0A087WSK7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28778A0A087WSK7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.46■□□□□ 0.87
Gm28778A0A087WSK7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm28778A0A087WSK7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gm28778A0A087WSK7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm28778A0A087WSK7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.44■□□□□ 0.86
Gm28778A0A087WSK7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm28778A0A087WSK7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm28778A0A087WSK7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm28778A0A087WSK7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gm28778A0A087WSK7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm28778A0A087WSK7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gm28778A0A087WSK7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm28778A0A087WSK7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.41■□□□□ 0.86
Gm28778A0A087WSK7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Gm28778A0A087WSK7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.4■□□□□ 0.86
Gm28778A0A087WSK7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Gm28778A0A087WSK7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm28778A0A087WSK7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gm28778A0A087WSK7 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.39■□□□□ 0.85
Gm28778A0A087WSK7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gm28778A0A087WSK7 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm28778A0A087WSK7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gm28778A0A087WSK7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm28778A0A087WSK7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28778A0A087WSK7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28778A0A087WSK7 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28778A0A087WSK7 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Gm28778A0A087WSK7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Gm28778A0A087WSK7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.33■□□□□ 0.85
Gm28778A0A087WSK7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.33■□□□□ 0.84
Gm28778A0A087WSK7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Gm28778A0A087WSK7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28778A0A087WSK7 Zxda-201ENSMUST00000117281 2621 ntBASIC20.32■□□□□ 0.84
Gm28778A0A087WSK7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28778A0A087WSK7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28778A0A087WSK7 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28778A0A087WSK7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28778A0A087WSK7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.3■□□□□ 0.84
Gm28778A0A087WSK7 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms