Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.31■□□□□ 0.68
Trav6d-7A0A075B6B0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav6d-7A0A075B6B0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav6d-7A0A075B6B0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
Trav6d-7A0A075B6B0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav6d-7A0A075B6B0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav6d-7A0A075B6B0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav6d-7A0A075B6B0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav6d-7A0A075B6B0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav6d-7A0A075B6B0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav6d-7A0A075B6B0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav6d-7A0A075B6B0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trav6d-7A0A075B6B0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trav6d-7A0A075B6B0 Mipep-204ENSMUST00000225043 1548 ntBASIC19.28■□□□□ 0.68
Trav6d-7A0A075B6B0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav6d-7A0A075B6B0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trav6d-7A0A075B6B0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav6d-7A0A075B6B0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.25■□□□□ 0.67
Trav6d-7A0A075B6B0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav6d-7A0A075B6B0 Gm16148-201ENSMUST00000119653 893 ntBASIC19.25■□□□□ 0.67
Trav6d-7A0A075B6B0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav6d-7A0A075B6B0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav6d-7A0A075B6B0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav6d-7A0A075B6B0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
Trav6d-7A0A075B6B0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trav6d-7A0A075B6B0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trav6d-7A0A075B6B0 Zfp131-205ENSMUST00000223812 663 ntBASIC19.22■□□□□ 0.67
Trav6d-7A0A075B6B0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav6d-7A0A075B6B0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav6d-7A0A075B6B0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav6d-7A0A075B6B0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav6d-7A0A075B6B0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav6d-7A0A075B6B0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav6d-7A0A075B6B0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav6d-7A0A075B6B0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav6d-7A0A075B6B0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav6d-7A0A075B6B0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav6d-7A0A075B6B0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav6d-7A0A075B6B0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav6d-7A0A075B6B0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav6d-7A0A075B6B0 Peli2-204ENSMUST00000226513 1320 ntBASIC19.15■□□□□ 0.66
Trav6d-7A0A075B6B0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav6d-7A0A075B6B0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Trav6d-7A0A075B6B0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trav6d-7A0A075B6B0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trav6d-7A0A075B6B0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Trav6d-7A0A075B6B0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.1■□□□□ 0.65
Trav6d-7A0A075B6B0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav6d-7A0A075B6B0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav6d-7A0A075B6B0 Amer2-203ENSMUST00000225247 2662 ntBASIC19.09■□□□□ 0.65
Trav6d-7A0A075B6B0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.09■□□□□ 0.65
Trav6d-7A0A075B6B0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav6d-7A0A075B6B0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.09■□□□□ 0.65
Trav6d-7A0A075B6B0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav6d-7A0A075B6B0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trav6d-7A0A075B6B0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav6d-7A0A075B6B0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Trav6d-7A0A075B6B0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav6d-7A0A075B6B0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav6d-7A0A075B6B0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Trav6d-7A0A075B6B0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Trav6d-7A0A075B6B0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav6d-7A0A075B6B0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav6d-7A0A075B6B0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav6d-7A0A075B6B0 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.02■□□□□ 0.64
Trav6d-7A0A075B6B0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Trav6d-7A0A075B6B0 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.01■□□□□ 0.63
Trav6d-7A0A075B6B0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav6d-7A0A075B6B0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav6d-7A0A075B6B0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav6d-7A0A075B6B0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav6d-7A0A075B6B0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.98■□□□□ 0.63
Trav6d-7A0A075B6B0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.97■□□□□ 0.63
Trav6d-7A0A075B6B0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav6d-7A0A075B6B0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Trav6d-7A0A075B6B0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trav6d-7A0A075B6B0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.95■□□□□ 0.62
Trav6d-7A0A075B6B0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav6d-7A0A075B6B0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav6d-7A0A075B6B0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav6d-7A0A075B6B0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.94■□□□□ 0.62
Trav6d-7A0A075B6B0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trav6d-7A0A075B6B0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trav6d-7A0A075B6B0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav6d-7A0A075B6B0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.93■□□□□ 0.62
Trav6d-7A0A075B6B0 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.93■□□□□ 0.62
Trav6d-7A0A075B6B0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav6d-7A0A075B6B0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6d-7A0A075B6B0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6d-7A0A075B6B0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Trav6d-7A0A075B6B0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.91■□□□□ 0.62
Trav6d-7A0A075B6B0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav6d-7A0A075B6B0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.91■□□□□ 0.62
Trav6d-7A0A075B6B0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav6d-7A0A075B6B0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav6d-7A0A075B6B0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav6d-7A0A075B6B0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav6d-7A0A075B6B0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav6d-7A0A075B6B0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trav6d-7A0A075B6B0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 271.8 ms