Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Gm25262-201ENSMUST00000174934 133 ntBASIC19.16■□□□□ 0.66
Trdv1A0A075B657 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trdv1A0A075B657 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trdv1A0A075B657 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trdv1A0A075B657 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trdv1A0A075B657 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trdv1A0A075B657 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trdv1A0A075B657 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trdv1A0A075B657 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.14■□□□□ 0.65
Trdv1A0A075B657 Amer2-203ENSMUST00000225247 2662 ntBASIC19.13■□□□□ 0.65
Trdv1A0A075B657 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trdv1A0A075B657 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trdv1A0A075B657 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trdv1A0A075B657 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trdv1A0A075B657 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.1■□□□□ 0.65
Trdv1A0A075B657 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trdv1A0A075B657 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trdv1A0A075B657 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trdv1A0A075B657 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trdv1A0A075B657 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trdv1A0A075B657 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trdv1A0A075B657 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trdv1A0A075B657 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.09■□□□□ 0.65
Trdv1A0A075B657 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Trdv1A0A075B657 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trdv1A0A075B657 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Trdv1A0A075B657 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Trdv1A0A075B657 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trdv1A0A075B657 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trdv1A0A075B657 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.05■□□□□ 0.64
Trdv1A0A075B657 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trdv1A0A075B657 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trdv1A0A075B657 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trdv1A0A075B657 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trdv1A0A075B657 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.05■□□□□ 0.64
Trdv1A0A075B657 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.05■□□□□ 0.64
Trdv1A0A075B657 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trdv1A0A075B657 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trdv1A0A075B657 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.04■□□□□ 0.64
Trdv1A0A075B657 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Trdv1A0A075B657 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trdv1A0A075B657 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trdv1A0A075B657 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
Trdv1A0A075B657 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trdv1A0A075B657 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
Trdv1A0A075B657 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trdv1A0A075B657 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trdv1A0A075B657 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19■□□□□ 0.63
Trdv1A0A075B657 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trdv1A0A075B657 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trdv1A0A075B657 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.97■□□□□ 0.63
Trdv1A0A075B657 Gm27322-201ENSMUST00000184007 104 ntBASIC18.97■□□□□ 0.63
Trdv1A0A075B657 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trdv1A0A075B657 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.96■□□□□ 0.63
Trdv1A0A075B657 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trdv1A0A075B657 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Trdv1A0A075B657 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trdv1A0A075B657 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trdv1A0A075B657 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trdv1A0A075B657 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.94■□□□□ 0.62
Trdv1A0A075B657 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
Trdv1A0A075B657 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.94■□□□□ 0.62
Trdv1A0A075B657 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.94■□□□□ 0.62
Trdv1A0A075B657 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.94■□□□□ 0.62
Trdv1A0A075B657 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trdv1A0A075B657 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trdv1A0A075B657 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trdv1A0A075B657 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Trdv1A0A075B657 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trdv1A0A075B657 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trdv1A0A075B657 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trdv1A0A075B657 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trdv1A0A075B657 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trdv1A0A075B657 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.9■□□□□ 0.62
Trdv1A0A075B657 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trdv1A0A075B657 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trdv1A0A075B657 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trdv1A0A075B657 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trdv1A0A075B657 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trdv1A0A075B657 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trdv1A0A075B657 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trdv1A0A075B657 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trdv1A0A075B657 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trdv1A0A075B657 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trdv1A0A075B657 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trdv1A0A075B657 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trdv1A0A075B657 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Trdv1A0A075B657 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trdv1A0A075B657 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trdv1A0A075B657 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trdv1A0A075B657 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.85■□□□□ 0.61
Trdv1A0A075B657 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trdv1A0A075B657 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Trdv1A0A075B657 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trdv1A0A075B657 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trdv1A0A075B657 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trdv1A0A075B657 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trdv1A0A075B657 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.8■□□□□ 0.6
Trdv1A0A075B657 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trdv1A0A075B657 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms