Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trav8n-2A0A075B633 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Trav8n-2A0A075B633 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Trav8n-2A0A075B633 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Trav8n-2A0A075B633 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.81■■□□□ 1.4
Trav8n-2A0A075B633 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
Trav8n-2A0A075B633 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.78■■□□□ 1.4
Trav8n-2A0A075B633 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.78■■□□□ 1.4
Trav8n-2A0A075B633 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trav8n-2A0A075B633 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Trav8n-2A0A075B633 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Trav8n-2A0A075B633 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.75■■□□□ 1.39
Trav8n-2A0A075B633 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.73■■□□□ 1.39
Trav8n-2A0A075B633 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Trav8n-2A0A075B633 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.73■■□□□ 1.39
Trav8n-2A0A075B633 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.73■■□□□ 1.39
Trav8n-2A0A075B633 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trav8n-2A0A075B633 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Trav8n-2A0A075B633 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trav8n-2A0A075B633 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trav8n-2A0A075B633 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trav8n-2A0A075B633 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trav8n-2A0A075B633 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Trav8n-2A0A075B633 Gm8503-201ENSMUST00000118131 455 ntBASIC23.68■■□□□ 1.38
Trav8n-2A0A075B633 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trav8n-2A0A075B633 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.67■■□□□ 1.38
Trav8n-2A0A075B633 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.66■■□□□ 1.38
Trav8n-2A0A075B633 Gm6821-201ENSMUST00000107540 542 ntBASIC23.65■■□□□ 1.38
Trav8n-2A0A075B633 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Trav8n-2A0A075B633 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trav8n-2A0A075B633 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trav8n-2A0A075B633 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trav8n-2A0A075B633 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trav8n-2A0A075B633 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.62■■□□□ 1.37
Trav8n-2A0A075B633 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.62■■□□□ 1.37
Trav8n-2A0A075B633 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trav8n-2A0A075B633 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trav8n-2A0A075B633 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Trav8n-2A0A075B633 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Trav8n-2A0A075B633 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trav8n-2A0A075B633 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
Trav8n-2A0A075B633 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Trav8n-2A0A075B633 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trav8n-2A0A075B633 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.57■■□□□ 1.36
Trav8n-2A0A075B633 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trav8n-2A0A075B633 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trav8n-2A0A075B633 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trav8n-2A0A075B633 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.54■■□□□ 1.36
Trav8n-2A0A075B633 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Trav8n-2A0A075B633 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trav8n-2A0A075B633 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trav8n-2A0A075B633 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Trav8n-2A0A075B633 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trav8n-2A0A075B633 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trav8n-2A0A075B633 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trav8n-2A0A075B633 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trav8n-2A0A075B633 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
Trav8n-2A0A075B633 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trav8n-2A0A075B633 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.49■■□□□ 1.35
Trav8n-2A0A075B633 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trav8n-2A0A075B633 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Trav8n-2A0A075B633 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Trav8n-2A0A075B633 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Trav8n-2A0A075B633 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Trav8n-2A0A075B633 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trav8n-2A0A075B633 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Trav8n-2A0A075B633 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Trav8n-2A0A075B633 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Trav8n-2A0A075B633 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.43■■□□□ 1.34
Trav8n-2A0A075B633 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Trav8n-2A0A075B633 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Trav8n-2A0A075B633 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.4■■□□□ 1.34
Trav8n-2A0A075B633 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Trav8n-2A0A075B633 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Trav8n-2A0A075B633 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trav8n-2A0A075B633 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Trav8n-2A0A075B633 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.38■■□□□ 1.33
Trav8n-2A0A075B633 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
Trav8n-2A0A075B633 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Trav8n-2A0A075B633 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trav8n-2A0A075B633 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Trav8n-2A0A075B633 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.36■■□□□ 1.33
Trav8n-2A0A075B633 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trav8n-2A0A075B633 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trav8n-2A0A075B633 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trav8n-2A0A075B633 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trav8n-2A0A075B633 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.33■■□□□ 1.33
Trav8n-2A0A075B633 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trav8n-2A0A075B633 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Trav8n-2A0A075B633 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Trav8n-2A0A075B633 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
Trav8n-2A0A075B633 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trav8n-2A0A075B633 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trav8n-2A0A075B633 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.31■■□□□ 1.32
Trav8n-2A0A075B633 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trav8n-2A0A075B633 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trav8n-2A0A075B633 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Trav8n-2A0A075B633 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trav8n-2A0A075B633 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
Trav8n-2A0A075B633 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.28■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms