Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trav9n-4A0A075B631 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav9n-4A0A075B631 Gm26115-201ENSMUST00000175605 87 ntBASIC17.1■□□□□ 0.33
Trav9n-4A0A075B631 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav9n-4A0A075B631 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.09■□□□□ 0.33
Trav9n-4A0A075B631 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav9n-4A0A075B631 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav9n-4A0A075B631 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav9n-4A0A075B631 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.09■□□□□ 0.33
Trav9n-4A0A075B631 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav9n-4A0A075B631 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Trav9n-4A0A075B631 Gm8109-201ENSMUST00000194076 746 ntBASIC17.08■□□□□ 0.32
Trav9n-4A0A075B631 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trav9n-4A0A075B631 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9n-4A0A075B631 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav9n-4A0A075B631 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC17.06■□□□□ 0.32
Trav9n-4A0A075B631 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Trav9n-4A0A075B631 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav9n-4A0A075B631 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9n-4A0A075B631 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav9n-4A0A075B631 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav9n-4A0A075B631 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav9n-4A0A075B631 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9n-4A0A075B631 Gm43445-201ENSMUST00000198564 2091 ntBASIC17.02■□□□□ 0.32
Trav9n-4A0A075B631 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9n-4A0A075B631 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trav9n-4A0A075B631 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trav9n-4A0A075B631 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav9n-4A0A075B631 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
Trav9n-4A0A075B631 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav9n-4A0A075B631 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav9n-4A0A075B631 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav9n-4A0A075B631 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav9n-4A0A075B631 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav9n-4A0A075B631 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav9n-4A0A075B631 Gm6345-201ENSMUST00000180378 1691 ntBASIC16.97■□□□□ 0.31
Trav9n-4A0A075B631 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav9n-4A0A075B631 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav9n-4A0A075B631 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav9n-4A0A075B631 Peli2-204ENSMUST00000226513 1320 ntBASIC16.95■□□□□ 0.3
Trav9n-4A0A075B631 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav9n-4A0A075B631 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav9n-4A0A075B631 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav9n-4A0A075B631 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav9n-4A0A075B631 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trav9n-4A0A075B631 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav9n-4A0A075B631 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trav9n-4A0A075B631 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav9n-4A0A075B631 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav9n-4A0A075B631 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav9n-4A0A075B631 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav9n-4A0A075B631 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav9n-4A0A075B631 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav9n-4A0A075B631 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav9n-4A0A075B631 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trav9n-4A0A075B631 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav9n-4A0A075B631 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav9n-4A0A075B631 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Trav9n-4A0A075B631 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trav9n-4A0A075B631 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav9n-4A0A075B631 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav9n-4A0A075B631 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav9n-4A0A075B631 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav9n-4A0A075B631 Gm30346-201ENSMUST00000218641 1699 ntBASIC16.88■□□□□ 0.29
Trav9n-4A0A075B631 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav9n-4A0A075B631 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav9n-4A0A075B631 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav9n-4A0A075B631 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
Trav9n-4A0A075B631 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav9n-4A0A075B631 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9n-4A0A075B631 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9n-4A0A075B631 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9n-4A0A075B631 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav9n-4A0A075B631 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trav9n-4A0A075B631 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav9n-4A0A075B631 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav9n-4A0A075B631 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Trav9n-4A0A075B631 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav9n-4A0A075B631 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Trav9n-4A0A075B631 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav9n-4A0A075B631 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trav9n-4A0A075B631 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav9n-4A0A075B631 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav9n-4A0A075B631 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav9n-4A0A075B631 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav9n-4A0A075B631 Amer2-203ENSMUST00000225247 2662 ntBASIC16.81■□□□□ 0.28
Trav9n-4A0A075B631 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav9n-4A0A075B631 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC16.81■□□□□ 0.28
Trav9n-4A0A075B631 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav9n-4A0A075B631 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav9n-4A0A075B631 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9n-4A0A075B631 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9n-4A0A075B631 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9n-4A0A075B631 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC16.8■□□□□ 0.28
Trav9n-4A0A075B631 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9n-4A0A075B631 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav9n-4A0A075B631 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav9n-4A0A075B631 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC16.79■□□□□ 0.28
Trav9n-4A0A075B631 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav9n-4A0A075B631 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms