Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav4d-3A0A075B625 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav4d-3A0A075B625 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav4d-3A0A075B625 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav4d-3A0A075B625 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trav4d-3A0A075B625 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trav4d-3A0A075B625 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav4d-3A0A075B625 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav4d-3A0A075B625 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav4d-3A0A075B625 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trav4d-3A0A075B625 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.13■□□□□ 0.33
Trav4d-3A0A075B625 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav4d-3A0A075B625 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav4d-3A0A075B625 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav4d-3A0A075B625 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav4d-3A0A075B625 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav4d-3A0A075B625 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav4d-3A0A075B625 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav4d-3A0A075B625 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav4d-3A0A075B625 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trav4d-3A0A075B625 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav4d-3A0A075B625 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav4d-3A0A075B625 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav4d-3A0A075B625 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.06■□□□□ 0.32
Trav4d-3A0A075B625 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trav4d-3A0A075B625 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav4d-3A0A075B625 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav4d-3A0A075B625 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav4d-3A0A075B625 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav4d-3A0A075B625 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav4d-3A0A075B625 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav4d-3A0A075B625 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.03■□□□□ 0.32
Trav4d-3A0A075B625 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav4d-3A0A075B625 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.02■□□□□ 0.32
Trav4d-3A0A075B625 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav4d-3A0A075B625 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Trav4d-3A0A075B625 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav4d-3A0A075B625 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav4d-3A0A075B625 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trav4d-3A0A075B625 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav4d-3A0A075B625 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav4d-3A0A075B625 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trav4d-3A0A075B625 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trav4d-3A0A075B625 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav4d-3A0A075B625 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav4d-3A0A075B625 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trav4d-3A0A075B625 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav4d-3A0A075B625 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav4d-3A0A075B625 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav4d-3A0A075B625 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav4d-3A0A075B625 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav4d-3A0A075B625 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav4d-3A0A075B625 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC16.94■□□□□ 0.3
Trav4d-3A0A075B625 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav4d-3A0A075B625 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav4d-3A0A075B625 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav4d-3A0A075B625 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav4d-3A0A075B625 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav4d-3A0A075B625 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Trav4d-3A0A075B625 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav4d-3A0A075B625 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav4d-3A0A075B625 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav4d-3A0A075B625 AC153890.1-201ENSMUST00000220021 2469 ntBASIC16.88■□□□□ 0.29
Trav4d-3A0A075B625 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav4d-3A0A075B625 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav4d-3A0A075B625 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav4d-3A0A075B625 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC16.87■□□□□ 0.29
Trav4d-3A0A075B625 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Trav4d-3A0A075B625 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav4d-3A0A075B625 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trav4d-3A0A075B625 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4d-3A0A075B625 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4d-3A0A075B625 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4d-3A0A075B625 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4d-3A0A075B625 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4d-3A0A075B625 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav4d-3A0A075B625 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.83■□□□□ 0.28
Trav4d-3A0A075B625 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav4d-3A0A075B625 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav4d-3A0A075B625 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav4d-3A0A075B625 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav4d-3A0A075B625 Mipep-204ENSMUST00000225043 1548 ntBASIC16.82■□□□□ 0.28
Trav4d-3A0A075B625 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav4d-3A0A075B625 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav4d-3A0A075B625 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav4d-3A0A075B625 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trav4d-3A0A075B625 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trav4d-3A0A075B625 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav4d-3A0A075B625 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav4d-3A0A075B625 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav4d-3A0A075B625 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav4d-3A0A075B625 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav4d-3A0A075B625 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Trav4d-3A0A075B625 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav4d-3A0A075B625 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav4d-3A0A075B625 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav4d-3A0A075B625 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav4d-3A0A075B625 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav4d-3A0A075B625 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav4d-3A0A075B625 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms