Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Trav9-1A0A075B601 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Trav9-1A0A075B601 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.65■□□□□ 0.74
Trav9-1A0A075B601 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trav9-1A0A075B601 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trav9-1A0A075B601 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav9-1A0A075B601 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Trav9-1A0A075B601 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trav9-1A0A075B601 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav9-1A0A075B601 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.59■□□□□ 0.73
Trav9-1A0A075B601 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav9-1A0A075B601 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.59■□□□□ 0.73
Trav9-1A0A075B601 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav9-1A0A075B601 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav9-1A0A075B601 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav9-1A0A075B601 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.73
Trav9-1A0A075B601 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav9-1A0A075B601 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav9-1A0A075B601 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.56■□□□□ 0.72
Trav9-1A0A075B601 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav9-1A0A075B601 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav9-1A0A075B601 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav9-1A0A075B601 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
Trav9-1A0A075B601 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trav9-1A0A075B601 Peli2-204ENSMUST00000226513 1320 ntBASIC19.53■□□□□ 0.72
Trav9-1A0A075B601 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav9-1A0A075B601 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.52■□□□□ 0.72
Trav9-1A0A075B601 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trav9-1A0A075B601 Amer2-203ENSMUST00000225247 2662 ntBASIC19.52■□□□□ 0.72
Trav9-1A0A075B601 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav9-1A0A075B601 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav9-1A0A075B601 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav9-1A0A075B601 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav9-1A0A075B601 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Trav9-1A0A075B601 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trav9-1A0A075B601 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav9-1A0A075B601 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav9-1A0A075B601 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav9-1A0A075B601 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav9-1A0A075B601 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trav9-1A0A075B601 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trav9-1A0A075B601 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trav9-1A0A075B601 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.46■□□□□ 0.71
Trav9-1A0A075B601 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Trav9-1A0A075B601 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav9-1A0A075B601 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Trav9-1A0A075B601 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav9-1A0A075B601 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav9-1A0A075B601 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Trav9-1A0A075B601 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav9-1A0A075B601 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav9-1A0A075B601 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trav9-1A0A075B601 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav9-1A0A075B601 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav9-1A0A075B601 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav9-1A0A075B601 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.42■□□□□ 0.7
Trav9-1A0A075B601 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.41■□□□□ 0.7
Trav9-1A0A075B601 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Trav9-1A0A075B601 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav9-1A0A075B601 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav9-1A0A075B601 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav9-1A0A075B601 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trav9-1A0A075B601 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.4■□□□□ 0.7
Trav9-1A0A075B601 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav9-1A0A075B601 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav9-1A0A075B601 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav9-1A0A075B601 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav9-1A0A075B601 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav9-1A0A075B601 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav9-1A0A075B601 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav9-1A0A075B601 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav9-1A0A075B601 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav9-1A0A075B601 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trav9-1A0A075B601 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav9-1A0A075B601 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav9-1A0A075B601 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trav9-1A0A075B601 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav9-1A0A075B601 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trav9-1A0A075B601 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trav9-1A0A075B601 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav9-1A0A075B601 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trav9-1A0A075B601 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav9-1A0A075B601 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trav9-1A0A075B601 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav9-1A0A075B601 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav9-1A0A075B601 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Trav9-1A0A075B601 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.3■□□□□ 0.68
Trav9-1A0A075B601 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav9-1A0A075B601 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Trav9-1A0A075B601 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav9-1A0A075B601 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav9-1A0A075B601 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav9-1A0A075B601 Gm24804-201ENSMUST00000174982 85 ntBASIC19.27■□□□□ 0.68
Trav9-1A0A075B601 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav9-1A0A075B601 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.27■□□□□ 0.68
Trav9-1A0A075B601 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trav9-1A0A075B601 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav9-1A0A075B601 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav9-1A0A075B601 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav9-1A0A075B601 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms