Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trav5-1A0A075B5Z7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trav5-1A0A075B5Z7 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Trav5-1A0A075B5Z7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Trav5-1A0A075B5Z7 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Trav5-1A0A075B5Z7 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trav5-1A0A075B5Z7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trav5-1A0A075B5Z7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trav5-1A0A075B5Z7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trav5-1A0A075B5Z7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trav5-1A0A075B5Z7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trav5-1A0A075B5Z7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trav5-1A0A075B5Z7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trav5-1A0A075B5Z7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trav5-1A0A075B5Z7 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trav5-1A0A075B5Z7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trav5-1A0A075B5Z7 Gm45855-201ENSMUST00000212546 880 ntBASIC21.94■■□□□ 1.1
Trav5-1A0A075B5Z7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Trav5-1A0A075B5Z7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.93■■□□□ 1.1
Trav5-1A0A075B5Z7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
Trav5-1A0A075B5Z7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trav5-1A0A075B5Z7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.91■■□□□ 1.1
Trav5-1A0A075B5Z7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trav5-1A0A075B5Z7 Gm9397-201ENSMUST00000200125 605 ntBASIC21.91■■□□□ 1.1
Trav5-1A0A075B5Z7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.89■■□□□ 1.09
Trav5-1A0A075B5Z7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trav5-1A0A075B5Z7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trav5-1A0A075B5Z7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trav5-1A0A075B5Z7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Trav5-1A0A075B5Z7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trav5-1A0A075B5Z7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trav5-1A0A075B5Z7 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trav5-1A0A075B5Z7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trav5-1A0A075B5Z7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trav5-1A0A075B5Z7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trav5-1A0A075B5Z7 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trav5-1A0A075B5Z7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.83■■□□□ 1.09
Trav5-1A0A075B5Z7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trav5-1A0A075B5Z7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trav5-1A0A075B5Z7 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.79■■□□□ 1.08
Trav5-1A0A075B5Z7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trav5-1A0A075B5Z7 Gm24970-201ENSMUST00000175582 82 ntBASIC21.78■■□□□ 1.08
Trav5-1A0A075B5Z7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.78■■□□□ 1.08
Trav5-1A0A075B5Z7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
Trav5-1A0A075B5Z7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.77■■□□□ 1.08
Trav5-1A0A075B5Z7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.77■■□□□ 1.08
Trav5-1A0A075B5Z7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trav5-1A0A075B5Z7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Trav5-1A0A075B5Z7 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trav5-1A0A075B5Z7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trav5-1A0A075B5Z7 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trav5-1A0A075B5Z7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Trav5-1A0A075B5Z7 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.75■■□□□ 1.07
Trav5-1A0A075B5Z7 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trav5-1A0A075B5Z7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Trav5-1A0A075B5Z7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trav5-1A0A075B5Z7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trav5-1A0A075B5Z7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.73■■□□□ 1.07
Trav5-1A0A075B5Z7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.73■■□□□ 1.07
Trav5-1A0A075B5Z7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trav5-1A0A075B5Z7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Trav5-1A0A075B5Z7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trav5-1A0A075B5Z7 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trav5-1A0A075B5Z7 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trav5-1A0A075B5Z7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trav5-1A0A075B5Z7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trav5-1A0A075B5Z7 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
Trav5-1A0A075B5Z7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trav5-1A0A075B5Z7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trav5-1A0A075B5Z7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trav5-1A0A075B5Z7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Trav5-1A0A075B5Z7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.66■■□□□ 1.06
Trav5-1A0A075B5Z7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trav5-1A0A075B5Z7 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.65■■□□□ 1.06
Trav5-1A0A075B5Z7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trav5-1A0A075B5Z7 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Trav5-1A0A075B5Z7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trav5-1A0A075B5Z7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Trav5-1A0A075B5Z7 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trav5-1A0A075B5Z7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trav5-1A0A075B5Z7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.62■■□□□ 1.05
Trav5-1A0A075B5Z7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.62■■□□□ 1.05
Trav5-1A0A075B5Z7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trav5-1A0A075B5Z7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trav5-1A0A075B5Z7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trav5-1A0A075B5Z7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trav5-1A0A075B5Z7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trav5-1A0A075B5Z7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Trav5-1A0A075B5Z7 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trav5-1A0A075B5Z7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trav5-1A0A075B5Z7 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trav5-1A0A075B5Z7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav5-1A0A075B5Z7 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trav5-1A0A075B5Z7 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trav5-1A0A075B5Z7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trav5-1A0A075B5Z7 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.57■■□□□ 1.04
Trav5-1A0A075B5Z7 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.56■■□□□ 1.04
Trav5-1A0A075B5Z7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trav5-1A0A075B5Z7 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Trav5-1A0A075B5Z7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms