Protein–RNA interactions for Protein: Q9CR92

Ccdc96, Coiled-coil domain-containing protein 96, mousemouse

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc96Q9CR92 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc96Q9CR92 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Ccdc96Q9CR92 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.8■■□□□ 1.08
Ccdc96Q9CR92 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc96Q9CR92 Mir6236-201ENSMUST00000184437 123 ntBASIC21.8■■□□□ 1.08
Ccdc96Q9CR92 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc96Q9CR92 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc96Q9CR92 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc96Q9CR92 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc96Q9CR92 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.8■■□□□ 1.08
Ccdc96Q9CR92 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.8■■□□□ 1.08
Ccdc96Q9CR92 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc96Q9CR92 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.8■■□□□ 1.08
Ccdc96Q9CR92 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc96Q9CR92 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc96Q9CR92 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc96Q9CR92 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc96Q9CR92 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
Ccdc96Q9CR92 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc96Q9CR92 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc96Q9CR92 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc96Q9CR92 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc96Q9CR92 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.79■■□□□ 1.08
Ccdc96Q9CR92 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Ccdc96Q9CR92 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc96Q9CR92 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Ccdc96Q9CR92 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Ccdc96Q9CR92 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc96Q9CR92 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc96Q9CR92 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Ccdc96Q9CR92 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Ccdc96Q9CR92 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC21.78■■□□□ 1.08
Ccdc96Q9CR92 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc96Q9CR92 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc96Q9CR92 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.78■■□□□ 1.08
Ccdc96Q9CR92 Gm42569-201ENSMUST00000200539 472 ntBASIC21.78■■□□□ 1.08
Ccdc96Q9CR92 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.78■■□□□ 1.08
Ccdc96Q9CR92 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.78■■□□□ 1.08
Ccdc96Q9CR92 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Ccdc96Q9CR92 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc96Q9CR92 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc96Q9CR92 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.78■■□□□ 1.08
Ccdc96Q9CR92 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc96Q9CR92 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc96Q9CR92 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.77■■□□□ 1.08
Ccdc96Q9CR92 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc96Q9CR92 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc96Q9CR92 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.77■■□□□ 1.08
Ccdc96Q9CR92 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc96Q9CR92 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Ccdc96Q9CR92 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc96Q9CR92 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.77■■□□□ 1.08
Ccdc96Q9CR92 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.77■■□□□ 1.08
Ccdc96Q9CR92 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc96Q9CR92 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc96Q9CR92 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Ccdc96Q9CR92 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc96Q9CR92 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Ccdc96Q9CR92 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc96Q9CR92 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc96Q9CR92 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Ccdc96Q9CR92 Gm40848-201ENSMUST00000221998 324 ntBASIC21.76■■□□□ 1.07
Ccdc96Q9CR92 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc96Q9CR92 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc96Q9CR92 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Ccdc96Q9CR92 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc96Q9CR92 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Ccdc96Q9CR92 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Ccdc96Q9CR92 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc96Q9CR92 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
Ccdc96Q9CR92 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.75■■□□□ 1.07
Ccdc96Q9CR92 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.75■■□□□ 1.07
Ccdc96Q9CR92 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc96Q9CR92 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc96Q9CR92 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
Ccdc96Q9CR92 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Ccdc96Q9CR92 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc96Q9CR92 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc96Q9CR92 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.74■■□□□ 1.07
Ccdc96Q9CR92 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc96Q9CR92 Gm10849-201ENSMUST00000100397 618 ntBASIC21.74■■□□□ 1.07
Ccdc96Q9CR92 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.74■■□□□ 1.07
Ccdc96Q9CR92 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc96Q9CR92 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Ccdc96Q9CR92 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc96Q9CR92 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc96Q9CR92 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Ccdc96Q9CR92 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.73■■□□□ 1.07
Ccdc96Q9CR92 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc96Q9CR92 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc96Q9CR92 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc96Q9CR92 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc96Q9CR92 Gm11421-201ENSMUST00000122124 294 ntBASIC21.73■■□□□ 1.07
Ccdc96Q9CR92 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ccdc96Q9CR92 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ccdc96Q9CR92 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc96Q9CR92 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
Ccdc96Q9CR92 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc96Q9CR92 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc96Q9CR92 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms