Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lrif1Q8CDD9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lrif1Q8CDD9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Lrif1Q8CDD9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.02■□□□□ 0.64
Lrif1Q8CDD9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.02■□□□□ 0.64
Lrif1Q8CDD9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lrif1Q8CDD9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lrif1Q8CDD9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.02■□□□□ 0.64
Lrif1Q8CDD9 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.02■□□□□ 0.64
Lrif1Q8CDD9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lrif1Q8CDD9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Lrif1Q8CDD9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.63
Lrif1Q8CDD9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Lrif1Q8CDD9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lrif1Q8CDD9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.01■□□□□ 0.63
Lrif1Q8CDD9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lrif1Q8CDD9 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.01■□□□□ 0.63
Lrif1Q8CDD9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lrif1Q8CDD9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Lrif1Q8CDD9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lrif1Q8CDD9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lrif1Q8CDD9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.01■□□□□ 0.63
Lrif1Q8CDD9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lrif1Q8CDD9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.01■□□□□ 0.63
Lrif1Q8CDD9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lrif1Q8CDD9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.01■□□□□ 0.63
Lrif1Q8CDD9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lrif1Q8CDD9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Lrif1Q8CDD9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lrif1Q8CDD9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lrif1Q8CDD9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Lrif1Q8CDD9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.01■□□□□ 0.63
Lrif1Q8CDD9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19■□□□□ 0.63
Lrif1Q8CDD9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lrif1Q8CDD9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Lrif1Q8CDD9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Lrif1Q8CDD9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lrif1Q8CDD9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lrif1Q8CDD9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Lrif1Q8CDD9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lrif1Q8CDD9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Lrif1Q8CDD9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lrif1Q8CDD9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lrif1Q8CDD9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lrif1Q8CDD9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.99■□□□□ 0.63
Lrif1Q8CDD9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.99■□□□□ 0.63
Lrif1Q8CDD9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.99■□□□□ 0.63
Lrif1Q8CDD9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.99■□□□□ 0.63
Lrif1Q8CDD9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lrif1Q8CDD9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
Lrif1Q8CDD9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lrif1Q8CDD9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lrif1Q8CDD9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lrif1Q8CDD9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lrif1Q8CDD9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Lrif1Q8CDD9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lrif1Q8CDD9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Lrif1Q8CDD9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lrif1Q8CDD9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lrif1Q8CDD9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lrif1Q8CDD9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lrif1Q8CDD9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Lrif1Q8CDD9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Lrif1Q8CDD9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lrif1Q8CDD9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lrif1Q8CDD9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lrif1Q8CDD9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lrif1Q8CDD9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lrif1Q8CDD9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lrif1Q8CDD9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lrif1Q8CDD9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lrif1Q8CDD9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lrif1Q8CDD9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lrif1Q8CDD9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.97■□□□□ 0.63
Lrif1Q8CDD9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.97■□□□□ 0.63
Lrif1Q8CDD9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.97■□□□□ 0.63
Lrif1Q8CDD9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.97■□□□□ 0.63
Lrif1Q8CDD9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lrif1Q8CDD9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Lrif1Q8CDD9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lrif1Q8CDD9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lrif1Q8CDD9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lrif1Q8CDD9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Lrif1Q8CDD9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Lrif1Q8CDD9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lrif1Q8CDD9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lrif1Q8CDD9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lrif1Q8CDD9 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.97■□□□□ 0.63
Lrif1Q8CDD9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lrif1Q8CDD9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lrif1Q8CDD9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lrif1Q8CDD9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lrif1Q8CDD9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lrif1Q8CDD9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lrif1Q8CDD9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lrif1Q8CDD9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lrif1Q8CDD9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Lrif1Q8CDD9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lrif1Q8CDD9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lrif1Q8CDD9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms