Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Syne1Q6ZWR6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Syne1Q6ZWR6 Gm37856-201ENSMUST00000191634 999 ntBASIC6.56□□□□□ -1.36
Syne1Q6ZWR6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Syne1Q6ZWR6 Gm10571-201ENSMUST00000097869 1638 ntBASIC6.56□□□□□ -1.36
Syne1Q6ZWR6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Syne1Q6ZWR6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Syne1Q6ZWR6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Syne1Q6ZWR6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Syne1Q6ZWR6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Syne1Q6ZWR6 AC135637.1-201ENSMUST00000227750 365 ntBASIC6.56□□□□□ -1.36
Syne1Q6ZWR6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
Syne1Q6ZWR6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Syne1Q6ZWR6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Syne1Q6ZWR6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Syne1Q6ZWR6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC6.56□□□□□ -1.36
Syne1Q6ZWR6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Syne1Q6ZWR6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Syne1Q6ZWR6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Syne1Q6ZWR6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Syne1Q6ZWR6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Syne1Q6ZWR6 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 Mir7071-201ENSMUST00000184847 69 ntBASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Syne1Q6ZWR6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Gm42911-201ENSMUST00000199360 1630 ntBASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Gm8520-201ENSMUST00000186517 868 ntBASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Gm6277-202ENSMUST00000224036 2779 ntBASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Syne1Q6ZWR6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Syne1Q6ZWR6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Syne1Q6ZWR6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC6.53□□□□□ -1.36
Syne1Q6ZWR6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Syne1Q6ZWR6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Syne1Q6ZWR6 AC122769.4-201ENSMUST00000228166 901 ntBASIC6.53□□□□□ -1.36
Syne1Q6ZWR6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Syne1Q6ZWR6 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Syne1Q6ZWR6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Syne1Q6ZWR6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Syne1Q6ZWR6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Syne1Q6ZWR6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Syne1Q6ZWR6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Syne1Q6ZWR6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Syne1Q6ZWR6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC6.53□□□□□ -1.36
Syne1Q6ZWR6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Syne1Q6ZWR6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Syne1Q6ZWR6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms