Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scube3Q66PY1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scube3Q66PY1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scube3Q66PY1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scube3Q66PY1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.27■□□□□ 0.84
Scube3Q66PY1 Gm9988-201ENSMUST00000069786 435 ntBASIC20.27■□□□□ 0.84
Scube3Q66PY1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scube3Q66PY1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scube3Q66PY1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scube3Q66PY1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scube3Q66PY1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Scube3Q66PY1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.26■□□□□ 0.83
Scube3Q66PY1 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.26■□□□□ 0.83
Scube3Q66PY1 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.26■□□□□ 0.83
Scube3Q66PY1 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.26■□□□□ 0.83
Scube3Q66PY1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scube3Q66PY1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.26■□□□□ 0.83
Scube3Q66PY1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scube3Q66PY1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scube3Q66PY1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scube3Q66PY1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scube3Q66PY1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scube3Q66PY1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scube3Q66PY1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scube3Q66PY1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Scube3Q66PY1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Scube3Q66PY1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scube3Q66PY1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.25■□□□□ 0.83
Scube3Q66PY1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scube3Q66PY1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scube3Q66PY1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scube3Q66PY1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scube3Q66PY1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scube3Q66PY1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scube3Q66PY1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.24■□□□□ 0.83
Scube3Q66PY1 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.24■□□□□ 0.83
Scube3Q66PY1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scube3Q66PY1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Scube3Q66PY1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scube3Q66PY1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scube3Q66PY1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scube3Q66PY1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.23■□□□□ 0.83
Scube3Q66PY1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scube3Q66PY1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scube3Q66PY1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.22■□□□□ 0.83
Scube3Q66PY1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scube3Q66PY1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scube3Q66PY1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scube3Q66PY1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.22■□□□□ 0.83
Scube3Q66PY1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Scube3Q66PY1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scube3Q66PY1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scube3Q66PY1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.22■□□□□ 0.83
Scube3Q66PY1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scube3Q66PY1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scube3Q66PY1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scube3Q66PY1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scube3Q66PY1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scube3Q66PY1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Scube3Q66PY1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scube3Q66PY1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Scube3Q66PY1 Gm42642-201ENSMUST00000200683 355 ntBASIC20.21■□□□□ 0.83
Scube3Q66PY1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scube3Q66PY1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scube3Q66PY1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scube3Q66PY1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Scube3Q66PY1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scube3Q66PY1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scube3Q66PY1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Scube3Q66PY1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scube3Q66PY1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Scube3Q66PY1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Scube3Q66PY1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Scube3Q66PY1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scube3Q66PY1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.2■□□□□ 0.82
Scube3Q66PY1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scube3Q66PY1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scube3Q66PY1 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.2■□□□□ 0.82
Scube3Q66PY1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scube3Q66PY1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Scube3Q66PY1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scube3Q66PY1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scube3Q66PY1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scube3Q66PY1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Scube3Q66PY1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Scube3Q66PY1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Scube3Q66PY1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Scube3Q66PY1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scube3Q66PY1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scube3Q66PY1 Reep4-203ENSMUST00000226563 1444 ntBASIC20.19■□□□□ 0.82
Scube3Q66PY1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Scube3Q66PY1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scube3Q66PY1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.19■□□□□ 0.82
Scube3Q66PY1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Scube3Q66PY1 Gm42778-201ENSMUST00000199644 553 ntBASIC20.19■□□□□ 0.82
Scube3Q66PY1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scube3Q66PY1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.19■□□□□ 0.82
Scube3Q66PY1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Scube3Q66PY1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scube3Q66PY1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 489 ms