Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SynbQ8BI41 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.37■□□□□ 0.53
SynbQ8BI41 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SynbQ8BI41 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.37■□□□□ 0.53
SynbQ8BI41 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SynbQ8BI41 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SynbQ8BI41 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SynbQ8BI41 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SynbQ8BI41 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SynbQ8BI41 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SynbQ8BI41 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SynbQ8BI41 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SynbQ8BI41 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SynbQ8BI41 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SynbQ8BI41 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SynbQ8BI41 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SynbQ8BI41 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SynbQ8BI41 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.35■□□□□ 0.53
SynbQ8BI41 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SynbQ8BI41 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.35■□□□□ 0.53
SynbQ8BI41 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.35■□□□□ 0.53
SynbQ8BI41 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SynbQ8BI41 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SynbQ8BI41 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SynbQ8BI41 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SynbQ8BI41 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SynbQ8BI41 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SynbQ8BI41 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SynbQ8BI41 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SynbQ8BI41 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SynbQ8BI41 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SynbQ8BI41 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SynbQ8BI41 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SynbQ8BI41 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SynbQ8BI41 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SynbQ8BI41 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
SynbQ8BI41 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SynbQ8BI41 Gm12933-201ENSMUST00000120203 872 ntBASIC18.34■□□□□ 0.53
SynbQ8BI41 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SynbQ8BI41 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SynbQ8BI41 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SynbQ8BI41 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SynbQ8BI41 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SynbQ8BI41 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SynbQ8BI41 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SynbQ8BI41 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SynbQ8BI41 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
SynbQ8BI41 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SynbQ8BI41 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.33■□□□□ 0.53
SynbQ8BI41 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SynbQ8BI41 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SynbQ8BI41 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.33■□□□□ 0.52
SynbQ8BI41 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.33■□□□□ 0.52
SynbQ8BI41 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
SynbQ8BI41 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SynbQ8BI41 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.33■□□□□ 0.52
SynbQ8BI41 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.33■□□□□ 0.52
SynbQ8BI41 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SynbQ8BI41 Gm10602-201ENSMUST00000098239 609 ntBASIC18.33■□□□□ 0.52
SynbQ8BI41 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SynbQ8BI41 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SynbQ8BI41 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SynbQ8BI41 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SynbQ8BI41 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
SynbQ8BI41 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SynbQ8BI41 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SynbQ8BI41 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.32■□□□□ 0.52
SynbQ8BI41 Mir6236-201ENSMUST00000184437 123 ntBASIC18.32■□□□□ 0.52
SynbQ8BI41 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.32■□□□□ 0.52
SynbQ8BI41 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SynbQ8BI41 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.32■□□□□ 0.52
SynbQ8BI41 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SynbQ8BI41 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.31■□□□□ 0.52
SynbQ8BI41 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SynbQ8BI41 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SynbQ8BI41 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SynbQ8BI41 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.31■□□□□ 0.52
SynbQ8BI41 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SynbQ8BI41 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SynbQ8BI41 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SynbQ8BI41 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SynbQ8BI41 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.3■□□□□ 0.52
SynbQ8BI41 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.3■□□□□ 0.52
SynbQ8BI41 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SynbQ8BI41 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SynbQ8BI41 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SynbQ8BI41 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SynbQ8BI41 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SynbQ8BI41 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SynbQ8BI41 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SynbQ8BI41 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SynbQ8BI41 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SynbQ8BI41 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.29■□□□□ 0.52
SynbQ8BI41 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SynbQ8BI41 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SynbQ8BI41 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SynbQ8BI41 Gm9988-201ENSMUST00000069786 435 ntBASIC18.29■□□□□ 0.52
SynbQ8BI41 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SynbQ8BI41 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SynbQ8BI41 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms