Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav9n-4A0A075B631 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9n-4A0A075B631 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9n-4A0A075B631 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9n-4A0A075B631 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9n-4A0A075B631 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav9n-4A0A075B631 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9n-4A0A075B631 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC13.25□□□□□ -0.29
Trav9n-4A0A075B631 Hsf1-204ENSMUST00000226872 2104 ntBASIC13.25□□□□□ -0.29
Trav9n-4A0A075B631 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9n-4A0A075B631 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9n-4A0A075B631 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9n-4A0A075B631 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav9n-4A0A075B631 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9n-4A0A075B631 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Trav9n-4A0A075B631 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9n-4A0A075B631 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9n-4A0A075B631 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9n-4A0A075B631 Gm9959-201ENSMUST00000068277 390 ntBASIC13.24□□□□□ -0.29
Trav9n-4A0A075B631 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav9n-4A0A075B631 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9n-4A0A075B631 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9n-4A0A075B631 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9n-4A0A075B631 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9n-4A0A075B631 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC13.23□□□□□ -0.29
Trav9n-4A0A075B631 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9n-4A0A075B631 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9n-4A0A075B631 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav9n-4A0A075B631 Gm22238-201ENSMUST00000175222 88 ntBASIC13.23□□□□□ -0.29
Trav9n-4A0A075B631 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav9n-4A0A075B631 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav9n-4A0A075B631 AC093043.1-201ENSMUST00000226700 898 ntBASIC13.23□□□□□ -0.29
Trav9n-4A0A075B631 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC13.23□□□□□ -0.29
Trav9n-4A0A075B631 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9n-4A0A075B631 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Trav9n-4A0A075B631 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9n-4A0A075B631 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9n-4A0A075B631 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9n-4A0A075B631 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9n-4A0A075B631 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9n-4A0A075B631 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Trav9n-4A0A075B631 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9n-4A0A075B631 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav9n-4A0A075B631 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Trav9n-4A0A075B631 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav9n-4A0A075B631 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav9n-4A0A075B631 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav9n-4A0A075B631 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9n-4A0A075B631 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9n-4A0A075B631 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav9n-4A0A075B631 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC13.22□□□□□ -0.29
Trav9n-4A0A075B631 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.22□□□□□ -0.29
Trav9n-4A0A075B631 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9n-4A0A075B631 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Trav9n-4A0A075B631 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9n-4A0A075B631 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9n-4A0A075B631 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9n-4A0A075B631 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav9n-4A0A075B631 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9n-4A0A075B631 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9n-4A0A075B631 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav9n-4A0A075B631 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9n-4A0A075B631 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav9n-4A0A075B631 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC13.21□□□□□ -0.29
Trav9n-4A0A075B631 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav9n-4A0A075B631 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9n-4A0A075B631 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9n-4A0A075B631 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC13.21□□□□□ -0.3
Trav9n-4A0A075B631 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav9n-4A0A075B631 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav9n-4A0A075B631 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav9n-4A0A075B631 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9n-4A0A075B631 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9n-4A0A075B631 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9n-4A0A075B631 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9n-4A0A075B631 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Trav9n-4A0A075B631 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9n-4A0A075B631 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9n-4A0A075B631 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9n-4A0A075B631 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9n-4A0A075B631 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9n-4A0A075B631 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9n-4A0A075B631 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9n-4A0A075B631 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav9n-4A0A075B631 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9n-4A0A075B631 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9n-4A0A075B631 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9n-4A0A075B631 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trav9n-4A0A075B631 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9n-4A0A075B631 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9n-4A0A075B631 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav9n-4A0A075B631 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9n-4A0A075B631 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9n-4A0A075B631 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9n-4A0A075B631 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9n-4A0A075B631 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9n-4A0A075B631 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9n-4A0A075B631 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9n-4A0A075B631 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav9n-4A0A075B631 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms