Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Scrt1Q99M85 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scrt1Q99M85 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Scrt1Q99M85 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scrt1Q99M85 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scrt1Q99M85 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scrt1Q99M85 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.04■□□□□ 0.32
Scrt1Q99M85 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scrt1Q99M85 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scrt1Q99M85 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scrt1Q99M85 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.03■□□□□ 0.32
Scrt1Q99M85 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scrt1Q99M85 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scrt1Q99M85 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scrt1Q99M85 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scrt1Q99M85 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.03■□□□□ 0.32
Scrt1Q99M85 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scrt1Q99M85 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scrt1Q99M85 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scrt1Q99M85 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scrt1Q99M85 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scrt1Q99M85 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scrt1Q99M85 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scrt1Q99M85 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.02■□□□□ 0.32
Scrt1Q99M85 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Scrt1Q99M85 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scrt1Q99M85 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scrt1Q99M85 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scrt1Q99M85 Gm13234-201ENSMUST00000120010 747 ntBASIC17.02■□□□□ 0.32
Scrt1Q99M85 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scrt1Q99M85 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scrt1Q99M85 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Scrt1Q99M85 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Scrt1Q99M85 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scrt1Q99M85 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scrt1Q99M85 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
Scrt1Q99M85 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scrt1Q99M85 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scrt1Q99M85 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scrt1Q99M85 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scrt1Q99M85 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.01■□□□□ 0.31
Scrt1Q99M85 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scrt1Q99M85 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scrt1Q99M85 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scrt1Q99M85 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scrt1Q99M85 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scrt1Q99M85 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Scrt1Q99M85 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scrt1Q99M85 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scrt1Q99M85 Gm12441-201ENSMUST00000121806 588 ntBASIC17■□□□□ 0.31
Scrt1Q99M85 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scrt1Q99M85 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scrt1Q99M85 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scrt1Q99M85 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scrt1Q99M85 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17■□□□□ 0.31
Scrt1Q99M85 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scrt1Q99M85 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scrt1Q99M85 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scrt1Q99M85 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Scrt1Q99M85 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scrt1Q99M85 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scrt1Q99M85 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scrt1Q99M85 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Scrt1Q99M85 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.99■□□□□ 0.31
Scrt1Q99M85 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.99■□□□□ 0.31
Scrt1Q99M85 Gm10252-201ENSMUST00000209541 832 ntBASIC16.99■□□□□ 0.31
Scrt1Q99M85 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scrt1Q99M85 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Scrt1Q99M85 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.99■□□□□ 0.31
Scrt1Q99M85 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.99■□□□□ 0.31
Scrt1Q99M85 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scrt1Q99M85 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Scrt1Q99M85 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scrt1Q99M85 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.98■□□□□ 0.31
Scrt1Q99M85 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scrt1Q99M85 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Scrt1Q99M85 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.98■□□□□ 0.31
Scrt1Q99M85 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scrt1Q99M85 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scrt1Q99M85 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Scrt1Q99M85 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scrt1Q99M85 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Scrt1Q99M85 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scrt1Q99M85 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Scrt1Q99M85 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scrt1Q99M85 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Scrt1Q99M85 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Scrt1Q99M85 Gm7514-201ENSMUST00000209475 934 ntBASIC16.97■□□□□ 0.31
Scrt1Q99M85 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.97■□□□□ 0.31
Scrt1Q99M85 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scrt1Q99M85 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Scrt1Q99M85 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scrt1Q99M85 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.96■□□□□ 0.31
Scrt1Q99M85 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scrt1Q99M85 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scrt1Q99M85 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scrt1Q99M85 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scrt1Q99M85 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scrt1Q99M85 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scrt1Q99M85 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 105.6 ms