Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rpap2Q8VC34 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rpap2Q8VC34 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rpap2Q8VC34 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rpap2Q8VC34 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rpap2Q8VC34 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rpap2Q8VC34 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rpap2Q8VC34 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rpap2Q8VC34 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.4■■□□□ 1.02
Rpap2Q8VC34 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rpap2Q8VC34 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Rpap2Q8VC34 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rpap2Q8VC34 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rpap2Q8VC34 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Rpap2Q8VC34 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Rpap2Q8VC34 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.39■■□□□ 1.01
Rpap2Q8VC34 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.39■■□□□ 1.01
Rpap2Q8VC34 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.39■■□□□ 1.01
Rpap2Q8VC34 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.39■■□□□ 1.01
Rpap2Q8VC34 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Rpap2Q8VC34 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rpap2Q8VC34 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rpap2Q8VC34 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rpap2Q8VC34 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.38■■□□□ 1.01
Rpap2Q8VC34 Gm43017-201ENSMUST00000198296 752 ntBASIC21.38■■□□□ 1.01
Rpap2Q8VC34 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rpap2Q8VC34 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rpap2Q8VC34 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rpap2Q8VC34 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rpap2Q8VC34 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rpap2Q8VC34 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rpap2Q8VC34 Gm11421-201ENSMUST00000122124 294 ntBASIC21.37■■□□□ 1.01
Rpap2Q8VC34 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rpap2Q8VC34 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rpap2Q8VC34 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rpap2Q8VC34 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rpap2Q8VC34 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.37■■□□□ 1.01
Rpap2Q8VC34 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rpap2Q8VC34 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rpap2Q8VC34 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rpap2Q8VC34 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rpap2Q8VC34 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Rpap2Q8VC34 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rpap2Q8VC34 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Rpap2Q8VC34 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Rpap2Q8VC34 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rpap2Q8VC34 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rpap2Q8VC34 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rpap2Q8VC34 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.35■■□□□ 1.01
Rpap2Q8VC34 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.35■■□□□ 1.01
Rpap2Q8VC34 Gm26833-201ENSMUST00000180899 440 ntBASIC21.35■■□□□ 1.01
Rpap2Q8VC34 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rpap2Q8VC34 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.35■■□□□ 1.01
Rpap2Q8VC34 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rpap2Q8VC34 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rpap2Q8VC34 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rpap2Q8VC34 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rpap2Q8VC34 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
Rpap2Q8VC34 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rpap2Q8VC34 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rpap2Q8VC34 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rpap2Q8VC34 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rpap2Q8VC34 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.34■■□□□ 1.01
Rpap2Q8VC34 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rpap2Q8VC34 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rpap2Q8VC34 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rpap2Q8VC34 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rpap2Q8VC34 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rpap2Q8VC34 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.33■■□□□ 1.01
Rpap2Q8VC34 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Rpap2Q8VC34 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rpap2Q8VC34 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.33■■□□□ 1.01
Rpap2Q8VC34 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rpap2Q8VC34 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Rpap2Q8VC34 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Rpap2Q8VC34 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Rpap2Q8VC34 Golph3-202ENSMUST00000226517 2359 ntBASIC21.32■■□□□ 1
Rpap2Q8VC34 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rpap2Q8VC34 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.32■■□□□ 1
Rpap2Q8VC34 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rpap2Q8VC34 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rpap2Q8VC34 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rpap2Q8VC34 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Rpap2Q8VC34 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Rpap2Q8VC34 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rpap2Q8VC34 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Rpap2Q8VC34 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Rpap2Q8VC34 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rpap2Q8VC34 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rpap2Q8VC34 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.31■■□□□ 1
Rpap2Q8VC34 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Rpap2Q8VC34 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rpap2Q8VC34 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rpap2Q8VC34 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rpap2Q8VC34 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rpap2Q8VC34 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rpap2Q8VC34 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rpap2Q8VC34 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Rpap2Q8VC34 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
Rpap2Q8VC34 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms