Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Smim4Q8C1Q6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smim4Q8C1Q6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smim4Q8C1Q6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smim4Q8C1Q6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Smim4Q8C1Q6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Smim4Q8C1Q6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Smim4Q8C1Q6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.36■□□□□ 0.21
Smim4Q8C1Q6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smim4Q8C1Q6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
Smim4Q8C1Q6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smim4Q8C1Q6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smim4Q8C1Q6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smim4Q8C1Q6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smim4Q8C1Q6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smim4Q8C1Q6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.35■□□□□ 0.21
Smim4Q8C1Q6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smim4Q8C1Q6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smim4Q8C1Q6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smim4Q8C1Q6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smim4Q8C1Q6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smim4Q8C1Q6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smim4Q8C1Q6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.35■□□□□ 0.21
Smim4Q8C1Q6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smim4Q8C1Q6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smim4Q8C1Q6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smim4Q8C1Q6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smim4Q8C1Q6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smim4Q8C1Q6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smim4Q8C1Q6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smim4Q8C1Q6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Smim4Q8C1Q6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smim4Q8C1Q6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smim4Q8C1Q6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smim4Q8C1Q6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smim4Q8C1Q6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smim4Q8C1Q6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smim4Q8C1Q6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smim4Q8C1Q6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smim4Q8C1Q6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smim4Q8C1Q6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smim4Q8C1Q6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smim4Q8C1Q6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smim4Q8C1Q6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smim4Q8C1Q6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smim4Q8C1Q6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smim4Q8C1Q6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smim4Q8C1Q6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
Smim4Q8C1Q6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smim4Q8C1Q6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.33■□□□□ 0.2
Smim4Q8C1Q6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smim4Q8C1Q6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smim4Q8C1Q6 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.33■□□□□ 0.2
Smim4Q8C1Q6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Smim4Q8C1Q6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smim4Q8C1Q6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smim4Q8C1Q6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Smim4Q8C1Q6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smim4Q8C1Q6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smim4Q8C1Q6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smim4Q8C1Q6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.32■□□□□ 0.2
Smim4Q8C1Q6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.32■□□□□ 0.2
Smim4Q8C1Q6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Smim4Q8C1Q6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smim4Q8C1Q6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.32■□□□□ 0.2
Smim4Q8C1Q6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Smim4Q8C1Q6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smim4Q8C1Q6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smim4Q8C1Q6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smim4Q8C1Q6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smim4Q8C1Q6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Smim4Q8C1Q6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smim4Q8C1Q6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smim4Q8C1Q6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smim4Q8C1Q6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.31■□□□□ 0.2
Smim4Q8C1Q6 Gm22238-201ENSMUST00000175222 88 ntBASIC16.31■□□□□ 0.2
Smim4Q8C1Q6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.31■□□□□ 0.2
Smim4Q8C1Q6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smim4Q8C1Q6 Gm9959-201ENSMUST00000068277 390 ntBASIC16.31■□□□□ 0.2
Smim4Q8C1Q6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smim4Q8C1Q6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.31■□□□□ 0.2
Smim4Q8C1Q6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smim4Q8C1Q6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smim4Q8C1Q6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.3■□□□□ 0.2
Smim4Q8C1Q6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smim4Q8C1Q6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smim4Q8C1Q6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smim4Q8C1Q6 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.3■□□□□ 0.2
Smim4Q8C1Q6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smim4Q8C1Q6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
Smim4Q8C1Q6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smim4Q8C1Q6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smim4Q8C1Q6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.3■□□□□ 0.2
Smim4Q8C1Q6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Smim4Q8C1Q6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.3■□□□□ 0.2
Smim4Q8C1Q6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.29■□□□□ 0.2
Smim4Q8C1Q6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smim4Q8C1Q6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smim4Q8C1Q6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smim4Q8C1Q6 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms