Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Trim43aQ3TL54 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim43aQ3TL54 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Trim43aQ3TL54 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim43aQ3TL54 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim43aQ3TL54 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trim43aQ3TL54 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim43aQ3TL54 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim43aQ3TL54 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trim43aQ3TL54 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.68■□□□□ 0.9
Trim43aQ3TL54 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim43aQ3TL54 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.68■□□□□ 0.9
Trim43aQ3TL54 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trim43aQ3TL54 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim43aQ3TL54 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trim43aQ3TL54 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Trim43aQ3TL54 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim43aQ3TL54 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim43aQ3TL54 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Trim43aQ3TL54 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim43aQ3TL54 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim43aQ3TL54 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim43aQ3TL54 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.67■□□□□ 0.9
Trim43aQ3TL54 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim43aQ3TL54 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim43aQ3TL54 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Trim43aQ3TL54 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Trim43aQ3TL54 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.67■□□□□ 0.9
Trim43aQ3TL54 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim43aQ3TL54 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim43aQ3TL54 Gm7417-201ENSMUST00000192950 473 ntBASIC20.66■□□□□ 0.9
Trim43aQ3TL54 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.66■□□□□ 0.9
Trim43aQ3TL54 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.66■□□□□ 0.9
Trim43aQ3TL54 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim43aQ3TL54 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim43aQ3TL54 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.66■□□□□ 0.9
Trim43aQ3TL54 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.66■□□□□ 0.9
Trim43aQ3TL54 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim43aQ3TL54 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim43aQ3TL54 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim43aQ3TL54 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim43aQ3TL54 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim43aQ3TL54 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim43aQ3TL54 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim43aQ3TL54 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Trim43aQ3TL54 Gm43530-201ENSMUST00000195920 274 ntBASIC20.65■□□□□ 0.9
Trim43aQ3TL54 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim43aQ3TL54 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim43aQ3TL54 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim43aQ3TL54 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim43aQ3TL54 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Trim43aQ3TL54 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim43aQ3TL54 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim43aQ3TL54 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Trim43aQ3TL54 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.64■□□□□ 0.9
Trim43aQ3TL54 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.64■□□□□ 0.9
Trim43aQ3TL54 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim43aQ3TL54 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim43aQ3TL54 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim43aQ3TL54 Gm40881-201ENSMUST00000223397 166 ntBASIC20.64■□□□□ 0.89
Trim43aQ3TL54 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Trim43aQ3TL54 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim43aQ3TL54 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim43aQ3TL54 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim43aQ3TL54 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim43aQ3TL54 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Trim43aQ3TL54 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim43aQ3TL54 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim43aQ3TL54 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Trim43aQ3TL54 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim43aQ3TL54 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim43aQ3TL54 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim43aQ3TL54 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim43aQ3TL54 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim43aQ3TL54 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Trim43aQ3TL54 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim43aQ3TL54 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.62■□□□□ 0.89
Trim43aQ3TL54 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim43aQ3TL54 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim43aQ3TL54 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Trim43aQ3TL54 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim43aQ3TL54 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Trim43aQ3TL54 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43aQ3TL54 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43aQ3TL54 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43aQ3TL54 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.61■□□□□ 0.89
Trim43aQ3TL54 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.61■□□□□ 0.89
Trim43aQ3TL54 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trim43aQ3TL54 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43aQ3TL54 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.61■□□□□ 0.89
Trim43aQ3TL54 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43aQ3TL54 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.61■□□□□ 0.89
Trim43aQ3TL54 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43aQ3TL54 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43aQ3TL54 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43aQ3TL54 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43aQ3TL54 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43aQ3TL54 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43aQ3TL54 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Trim43aQ3TL54 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms