Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Gm9959-201ENSMUST00000068277 390 ntBASIC16.29■□□□□ 0.2
Herpud1Q9JJK5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Herpud1Q9JJK5 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Herpud1Q9JJK5 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Herpud1Q9JJK5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Herpud1Q9JJK5 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Herpud1Q9JJK5 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Herpud1Q9JJK5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Herpud1Q9JJK5 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Herpud1Q9JJK5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Herpud1Q9JJK5 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Herpud1Q9JJK5 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Herpud1Q9JJK5 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Herpud1Q9JJK5 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Herpud1Q9JJK5 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Herpud1Q9JJK5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Herpud1Q9JJK5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Herpud1Q9JJK5 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.28■□□□□ 0.2
Herpud1Q9JJK5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Herpud1Q9JJK5 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Herpud1Q9JJK5 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Herpud1Q9JJK5 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Herpud1Q9JJK5 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Herpud1Q9JJK5 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Herpud1Q9JJK5 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Herpud1Q9JJK5 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Herpud1Q9JJK5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.27■□□□□ 0.2
Herpud1Q9JJK5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Herpud1Q9JJK5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Herpud1Q9JJK5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Herpud1Q9JJK5 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.27■□□□□ 0.2
Herpud1Q9JJK5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.27■□□□□ 0.2
Herpud1Q9JJK5 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Herpud1Q9JJK5 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Herpud1Q9JJK5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.27■□□□□ 0.2
Herpud1Q9JJK5 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Herpud1Q9JJK5 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Herpud1Q9JJK5 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Herpud1Q9JJK5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Herpud1Q9JJK5 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Herpud1Q9JJK5 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.26■□□□□ 0.19
Herpud1Q9JJK5 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Herpud1Q9JJK5 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Herpud1Q9JJK5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Herpud1Q9JJK5 Gm22238-201ENSMUST00000175222 88 ntBASIC16.26■□□□□ 0.19
Herpud1Q9JJK5 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.26■□□□□ 0.19
Herpud1Q9JJK5 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.26■□□□□ 0.19
Herpud1Q9JJK5 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Herpud1Q9JJK5 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Herpud1Q9JJK5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Herpud1Q9JJK5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Herpud1Q9JJK5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.25■□□□□ 0.19
Herpud1Q9JJK5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Herpud1Q9JJK5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Herpud1Q9JJK5 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Herpud1Q9JJK5 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Herpud1Q9JJK5 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Herpud1Q9JJK5 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.25■□□□□ 0.19
Herpud1Q9JJK5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Herpud1Q9JJK5 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Herpud1Q9JJK5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Herpud1Q9JJK5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Herpud1Q9JJK5 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Herpud1Q9JJK5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Herpud1Q9JJK5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Herpud1Q9JJK5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Herpud1Q9JJK5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Herpud1Q9JJK5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.24■□□□□ 0.19
Herpud1Q9JJK5 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
Herpud1Q9JJK5 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.24■□□□□ 0.19
Herpud1Q9JJK5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Herpud1Q9JJK5 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Herpud1Q9JJK5 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Herpud1Q9JJK5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Herpud1Q9JJK5 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Herpud1Q9JJK5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Herpud1Q9JJK5 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.24■□□□□ 0.19
Herpud1Q9JJK5 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Herpud1Q9JJK5 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Herpud1Q9JJK5 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Herpud1Q9JJK5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Herpud1Q9JJK5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
Herpud1Q9JJK5 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.23■□□□□ 0.19
Herpud1Q9JJK5 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.23■□□□□ 0.19
Herpud1Q9JJK5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Herpud1Q9JJK5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Herpud1Q9JJK5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.23■□□□□ 0.19
Herpud1Q9JJK5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Herpud1Q9JJK5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Herpud1Q9JJK5 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Herpud1Q9JJK5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Herpud1Q9JJK5 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Herpud1Q9JJK5 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Herpud1Q9JJK5 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.22■□□□□ 0.19
Herpud1Q9JJK5 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Herpud1Q9JJK5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Herpud1Q9JJK5 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.22■□□□□ 0.19
Herpud1Q9JJK5 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Herpud1Q9JJK5 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Herpud1Q9JJK5 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms