Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mbd3l1Q9D9H3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mbd3l1Q9D9H3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mbd3l1Q9D9H3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mbd3l1Q9D9H3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mbd3l1Q9D9H3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mbd3l1Q9D9H3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mbd3l1Q9D9H3 Terc-201ENSMUST00000082862 423 ntBASIC17.02■□□□□ 0.32
Mbd3l1Q9D9H3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Mbd3l1Q9D9H3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mbd3l1Q9D9H3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Mbd3l1Q9D9H3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mbd3l1Q9D9H3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mbd3l1Q9D9H3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Mbd3l1Q9D9H3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mbd3l1Q9D9H3 Gm37811-201ENSMUST00000192416 2601 ntBASIC17■□□□□ 0.31
Mbd3l1Q9D9H3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mbd3l1Q9D9H3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mbd3l1Q9D9H3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17■□□□□ 0.31
Mbd3l1Q9D9H3 BC021767-201ENSMUST00000126387 1716 ntBASIC17■□□□□ 0.31
Mbd3l1Q9D9H3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mbd3l1Q9D9H3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mbd3l1Q9D9H3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mbd3l1Q9D9H3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Mbd3l1Q9D9H3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mbd3l1Q9D9H3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mbd3l1Q9D9H3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17■□□□□ 0.31
Mbd3l1Q9D9H3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mbd3l1Q9D9H3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17■□□□□ 0.31
Mbd3l1Q9D9H3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Mbd3l1Q9D9H3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mbd3l1Q9D9H3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mbd3l1Q9D9H3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mbd3l1Q9D9H3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Mbd3l1Q9D9H3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mbd3l1Q9D9H3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mbd3l1Q9D9H3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.99■□□□□ 0.31
Mbd3l1Q9D9H3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.99■□□□□ 0.31
Mbd3l1Q9D9H3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mbd3l1Q9D9H3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Mbd3l1Q9D9H3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Mbd3l1Q9D9H3 Zfp131-205ENSMUST00000223812 663 ntBASIC16.99■□□□□ 0.31
Mbd3l1Q9D9H3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mbd3l1Q9D9H3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mbd3l1Q9D9H3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Mbd3l1Q9D9H3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Mbd3l1Q9D9H3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mbd3l1Q9D9H3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Mbd3l1Q9D9H3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mbd3l1Q9D9H3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mbd3l1Q9D9H3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC16.98■□□□□ 0.31
Mbd3l1Q9D9H3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC16.98■□□□□ 0.31
Mbd3l1Q9D9H3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Mbd3l1Q9D9H3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Mbd3l1Q9D9H3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mbd3l1Q9D9H3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Mbd3l1Q9D9H3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Mbd3l1Q9D9H3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mbd3l1Q9D9H3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mbd3l1Q9D9H3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mbd3l1Q9D9H3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Mbd3l1Q9D9H3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Mbd3l1Q9D9H3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mbd3l1Q9D9H3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.97■□□□□ 0.31
Mbd3l1Q9D9H3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Mbd3l1Q9D9H3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mbd3l1Q9D9H3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Mbd3l1Q9D9H3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mbd3l1Q9D9H3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mbd3l1Q9D9H3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mbd3l1Q9D9H3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mbd3l1Q9D9H3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mbd3l1Q9D9H3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mbd3l1Q9D9H3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mbd3l1Q9D9H3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms