Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q8VDP2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q8VDP2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q8VDP2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q8VDP2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q8VDP2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q8VDP2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.03■□□□□ 0.64
Q8VDP2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q8VDP2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.03■□□□□ 0.64
Q8VDP2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q8VDP2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q8VDP2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q8VDP2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Q8VDP2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Q8VDP2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q8VDP2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Q8VDP2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.02■□□□□ 0.64
Q8VDP2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Q8VDP2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Q8VDP2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Q8VDP2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Q8VDP2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Q8VDP2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Q8VDP2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Q8VDP2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Q8VDP2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Q8VDP2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Q8VDP2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Q8VDP2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Q8VDP2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Q8VDP2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Q8VDP2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Q8VDP2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Q8VDP2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Q8VDP2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Q8VDP2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Q8VDP2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Q8VDP2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Q8VDP2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Q8VDP2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19■□□□□ 0.63
Q8VDP2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19■□□□□ 0.63
Q8VDP2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19■□□□□ 0.63
Q8VDP2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Q8VDP2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Q8VDP2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Q8VDP2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19■□□□□ 0.63
Q8VDP2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Q8VDP2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Q8VDP2 Dapk1-207ENSMUST00000226059 5009 ntBASIC19■□□□□ 0.63
Q8VDP2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Q8VDP2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Q8VDP2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Q8VDP2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Q8VDP2 Gm4799-201ENSMUST00000095396 657 ntBASIC18.99■□□□□ 0.63
Q8VDP2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q8VDP2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q8VDP2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q8VDP2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q8VDP2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q8VDP2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Q8VDP2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q8VDP2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q8VDP2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Q8VDP2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.98■□□□□ 0.63
Q8VDP2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.98■□□□□ 0.63
Q8VDP2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q8VDP2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q8VDP2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Q8VDP2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Q8VDP2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q8VDP2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q8VDP2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q8VDP2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.97■□□□□ 0.63
Q8VDP2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Q8VDP2 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.97■□□□□ 0.63
Q8VDP2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q8VDP2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Q8VDP2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q8VDP2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.97■□□□□ 0.63
Q8VDP2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q8VDP2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Q8VDP2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q8VDP2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q8VDP2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Q8VDP2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Q8VDP2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Q8VDP2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Q8VDP2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Q8VDP2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Q8VDP2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Q8VDP2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Q8VDP2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Q8VDP2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Q8VDP2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Q8VDP2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.96■□□□□ 0.63
Q8VDP2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Q8VDP2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Q8VDP2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Q8VDP2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.96■□□□□ 0.63
Q8VDP2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms