Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Hoxd8P23463 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.5■□□□□ 0.87
Hoxd8P23463 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.5■□□□□ 0.87
Hoxd8P23463 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.5■□□□□ 0.87
Hoxd8P23463 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxd8P23463 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxd8P23463 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxd8P23463 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.5■□□□□ 0.87
Hoxd8P23463 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxd8P23463 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxd8P23463 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxd8P23463 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Hoxd8P23463 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxd8P23463 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxd8P23463 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxd8P23463 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxd8P23463 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Hoxd8P23463 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxd8P23463 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxd8P23463 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxd8P23463 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxd8P23463 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxd8P23463 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.48■□□□□ 0.87
Hoxd8P23463 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxd8P23463 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Hoxd8P23463 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.48■□□□□ 0.87
Hoxd8P23463 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxd8P23463 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Hoxd8P23463 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxd8P23463 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxd8P23463 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxd8P23463 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.48■□□□□ 0.87
Hoxd8P23463 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Hoxd8P23463 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxd8P23463 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxd8P23463 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxd8P23463 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxd8P23463 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxd8P23463 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxd8P23463 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.47■□□□□ 0.87
Hoxd8P23463 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxd8P23463 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
Hoxd8P23463 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.47■□□□□ 0.87
Hoxd8P23463 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxd8P23463 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Hoxd8P23463 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Hoxd8P23463 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Hoxd8P23463 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Hoxd8P23463 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.46■□□□□ 0.87
Hoxd8P23463 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.46■□□□□ 0.87
Hoxd8P23463 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxd8P23463 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxd8P23463 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxd8P23463 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxd8P23463 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxd8P23463 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxd8P23463 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Hoxd8P23463 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.45■□□□□ 0.86
Hoxd8P23463 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxd8P23463 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxd8P23463 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.45■□□□□ 0.86
Hoxd8P23463 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Hoxd8P23463 Gm38205-201ENSMUST00000192243 258 ntBASIC20.45■□□□□ 0.86
Hoxd8P23463 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxd8P23463 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxd8P23463 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Hoxd8P23463 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Hoxd8P23463 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hoxd8P23463 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hoxd8P23463 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Hoxd8P23463 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.44■□□□□ 0.86
Hoxd8P23463 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hoxd8P23463 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hoxd8P23463 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hoxd8P23463 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Hoxd8P23463 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hoxd8P23463 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxd8P23463 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxd8P23463 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxd8P23463 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Hoxd8P23463 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
Hoxd8P23463 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxd8P23463 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxd8P23463 Gm13534-201ENSMUST00000121169 513 ntBASIC20.43■□□□□ 0.86
Hoxd8P23463 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxd8P23463 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxd8P23463 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Hoxd8P23463 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxd8P23463 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxd8P23463 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxd8P23463 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxd8P23463 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxd8P23463 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxd8P23463 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxd8P23463 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.42■□□□□ 0.86
Hoxd8P23463 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Hoxd8P23463 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxd8P23463 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxd8P23463 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.41■□□□□ 0.86
Hoxd8P23463 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms