Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cpsf7Q8BTV2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf7Q8BTV2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cpsf7Q8BTV2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf7Q8BTV2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cpsf7Q8BTV2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cpsf7Q8BTV2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf7Q8BTV2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf7Q8BTV2 Gm15820-201ENSMUST00000201566 728 ntBASIC19.72■□□□□ 0.75
Cpsf7Q8BTV2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf7Q8BTV2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.72■□□□□ 0.75
Cpsf7Q8BTV2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.72■□□□□ 0.75
Cpsf7Q8BTV2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf7Q8BTV2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpsf7Q8BTV2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Cpsf7Q8BTV2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf7Q8BTV2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.71■□□□□ 0.75
Cpsf7Q8BTV2 Gm7143-201ENSMUST00000222811 859 ntBASIC19.71■□□□□ 0.75
Cpsf7Q8BTV2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.71■□□□□ 0.75
Cpsf7Q8BTV2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.71■□□□□ 0.75
Cpsf7Q8BTV2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Cpsf7Q8BTV2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpsf7Q8BTV2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf7Q8BTV2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf7Q8BTV2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cpsf7Q8BTV2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf7Q8BTV2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf7Q8BTV2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf7Q8BTV2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf7Q8BTV2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf7Q8BTV2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf7Q8BTV2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpsf7Q8BTV2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.69■□□□□ 0.74
Cpsf7Q8BTV2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf7Q8BTV2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf7Q8BTV2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cpsf7Q8BTV2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cpsf7Q8BTV2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cpsf7Q8BTV2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf7Q8BTV2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cpsf7Q8BTV2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Cpsf7Q8BTV2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf7Q8BTV2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf7Q8BTV2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cpsf7Q8BTV2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Cpsf7Q8BTV2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpsf7Q8BTV2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.68■□□□□ 0.74
Cpsf7Q8BTV2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpsf7Q8BTV2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpsf7Q8BTV2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Cpsf7Q8BTV2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cpsf7Q8BTV2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpsf7Q8BTV2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.68■□□□□ 0.74
Cpsf7Q8BTV2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpsf7Q8BTV2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Cpsf7Q8BTV2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf7Q8BTV2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf7Q8BTV2 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.67■□□□□ 0.74
Cpsf7Q8BTV2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf7Q8BTV2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.67■□□□□ 0.74
Cpsf7Q8BTV2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.67■□□□□ 0.74
Cpsf7Q8BTV2 Gm10399-202ENSMUST00000202768 748 ntBASIC19.67■□□□□ 0.74
Cpsf7Q8BTV2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf7Q8BTV2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf7Q8BTV2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf7Q8BTV2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf7Q8BTV2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf7Q8BTV2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf7Q8BTV2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Cpsf7Q8BTV2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cpsf7Q8BTV2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpsf7Q8BTV2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf7Q8BTV2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf7Q8BTV2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf7Q8BTV2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cpsf7Q8BTV2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf7Q8BTV2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.66■□□□□ 0.74
Cpsf7Q8BTV2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf7Q8BTV2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cpsf7Q8BTV2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cpsf7Q8BTV2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.65■□□□□ 0.74
Cpsf7Q8BTV2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf7Q8BTV2 Gm15039-201ENSMUST00000118914 875 ntBASIC19.65■□□□□ 0.74
Cpsf7Q8BTV2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf7Q8BTV2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf7Q8BTV2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.65■□□□□ 0.74
Cpsf7Q8BTV2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf7Q8BTV2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cpsf7Q8BTV2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cpsf7Q8BTV2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cpsf7Q8BTV2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Cpsf7Q8BTV2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cpsf7Q8BTV2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cpsf7Q8BTV2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Cpsf7Q8BTV2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cpsf7Q8BTV2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cpsf7Q8BTV2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.64■□□□□ 0.73
Cpsf7Q8BTV2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf7Q8BTV2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cpsf7Q8BTV2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms