Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.87■■□□□ 1.09
Usp6nlQ80XC3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Usp6nlQ80XC3 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.87■■□□□ 1.09
Usp6nlQ80XC3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Usp6nlQ80XC3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Usp6nlQ80XC3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Usp6nlQ80XC3 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.87■■□□□ 1.09
Usp6nlQ80XC3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Usp6nlQ80XC3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Usp6nlQ80XC3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Usp6nlQ80XC3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Usp6nlQ80XC3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Usp6nlQ80XC3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Usp6nlQ80XC3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Usp6nlQ80XC3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Usp6nlQ80XC3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Usp6nlQ80XC3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.85■■□□□ 1.09
Usp6nlQ80XC3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Usp6nlQ80XC3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Usp6nlQ80XC3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.85■■□□□ 1.09
Usp6nlQ80XC3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Usp6nlQ80XC3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Usp6nlQ80XC3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
Usp6nlQ80XC3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Usp6nlQ80XC3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
Usp6nlQ80XC3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Usp6nlQ80XC3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Usp6nlQ80XC3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Usp6nlQ80XC3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Usp6nlQ80XC3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Usp6nlQ80XC3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.83■■□□□ 1.09
Usp6nlQ80XC3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.83■■□□□ 1.09
Usp6nlQ80XC3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Usp6nlQ80XC3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Usp6nlQ80XC3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Usp6nlQ80XC3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Usp6nlQ80XC3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Usp6nlQ80XC3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Usp6nlQ80XC3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.82■■□□□ 1.08
Usp6nlQ80XC3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Usp6nlQ80XC3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Usp6nlQ80XC3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Usp6nlQ80XC3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Usp6nlQ80XC3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Usp6nlQ80XC3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Usp6nlQ80XC3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Usp6nlQ80XC3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Usp6nlQ80XC3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Usp6nlQ80XC3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.81■■□□□ 1.08
Usp6nlQ80XC3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.81■■□□□ 1.08
Usp6nlQ80XC3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.81■■□□□ 1.08
Usp6nlQ80XC3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.81■■□□□ 1.08
Usp6nlQ80XC3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.81■■□□□ 1.08
Usp6nlQ80XC3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Usp6nlQ80XC3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.81■■□□□ 1.08
Usp6nlQ80XC3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.81■■□□□ 1.08
Usp6nlQ80XC3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Usp6nlQ80XC3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Usp6nlQ80XC3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Usp6nlQ80XC3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Usp6nlQ80XC3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
Usp6nlQ80XC3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Usp6nlQ80XC3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Usp6nlQ80XC3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Usp6nlQ80XC3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Usp6nlQ80XC3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Usp6nlQ80XC3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Usp6nlQ80XC3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Usp6nlQ80XC3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Usp6nlQ80XC3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Usp6nlQ80XC3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Usp6nlQ80XC3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Usp6nlQ80XC3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.79■■□□□ 1.08
Usp6nlQ80XC3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Usp6nlQ80XC3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Usp6nlQ80XC3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.79■■□□□ 1.08
Usp6nlQ80XC3 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.79■■□□□ 1.08
Usp6nlQ80XC3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Usp6nlQ80XC3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp6nlQ80XC3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp6nlQ80XC3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Usp6nlQ80XC3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp6nlQ80XC3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp6nlQ80XC3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Usp6nlQ80XC3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.78■■□□□ 1.08
Usp6nlQ80XC3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Usp6nlQ80XC3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Usp6nlQ80XC3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp6nlQ80XC3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp6nlQ80XC3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Usp6nlQ80XC3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Usp6nlQ80XC3 Gm12441-201ENSMUST00000121806 588 ntBASIC21.77■■□□□ 1.08
Usp6nlQ80XC3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Usp6nlQ80XC3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.77■■□□□ 1.08
Usp6nlQ80XC3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.77■■□□□ 1.08
Usp6nlQ80XC3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Usp6nlQ80XC3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Usp6nlQ80XC3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Usp6nlQ80XC3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Usp6nlQ80XC3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms